Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G09
(857 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 149 5e-36
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 130 2e-30
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 130 2e-30
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 125 9e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 122 8e-28
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 120 3e-27
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 119 4e-27
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 118 1e-26
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 117 2e-26
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 117 2e-26
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 117 2e-26
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 114 1e-25
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 114 1e-25
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 114 1e-25
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 114 1e-25
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 114 1e-25
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 114 2e-25
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 111 2e-24
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 111 2e-24
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 111 2e-24
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 111 2e-24
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 95 1e-19
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 69 6e-12
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 59 9e-09
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 32 0.88
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 32 0.88
AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p pro... 27 5.4
AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconvention... 29 8.2
AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconvention... 29 8.2
AE014297-3479|AAZ52543.1| 464|Drosophila melanogaster CG5501-PG... 29 8.2
AE014297-3478|AAZ52542.1| 464|Drosophila melanogaster CG5501-PF... 29 8.2
AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE... 29 8.2
AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD... 29 8.2
AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB... 29 8.2
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 149 bits (361), Expect = 5e-36
Identities = 86/218 (39%), Positives = 115/218 (52%), Gaps = 8/218 (3%)
Frame = +2
Query: 62 RTVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI 241
R FP+ WK A ++ IHKPGKP+ P SYRPISLL S D ++ + I
Sbjct: 485 RVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRI 544
Query: 242 LIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 421
L D QFGFR HS V+QVHRLT+HIL + + Y A+F D+ +AFD+VWH+GLI K+
Sbjct: 545 LPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRVWHDGLISKV 602
Query: 422 FNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPR 601
+ P +++ +L +R F RV + S PR + AGVPQG D+P
Sbjct: 603 KKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPC 661
Query: 602 SPPXH--------LALFADDTTVYYSXXNXSLIAXKLQ 691
H LA +ADD + YS + A LQ
Sbjct: 662 PNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQ 699
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 130 bits (314), Expect = 2e-30
Identities = 73/207 (35%), Positives = 108/207 (52%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FPR WK A ++ I KPGKP ++P SYRPISLL F+ L
Sbjct: 513 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 572
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
Q+GFR + + +L +I + + + G + D+ AFD VWH+GL+ KL +G
Sbjct: 573 QYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIG 630
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
P L+ I+++FL++R F + ++S+ R L AGVPQG +DIP++
Sbjct: 631 TPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNC 690
Query: 614 HLALFADDTTVYYSXXNXSLIAXKLQS 694
L+LFADD VY + + S I +QS
Sbjct: 691 VLSLFADDAAVYSAGFSYSEINQSMQS 717
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 130 bits (314), Expect = 2e-30
Identities = 73/207 (35%), Positives = 108/207 (52%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FPR WK A ++ I KPGKP ++P SYRPISLL F+ L
Sbjct: 461 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 520
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
Q+GFR + + +L +I + + + G + D+ AFD VWH+GL+ KL +G
Sbjct: 521 QYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIG 578
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
P L+ I+++FL++R F + ++S+ R L AGVPQG +DIP++
Sbjct: 579 TPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNC 638
Query: 614 HLALFADDTTVYYSXXNXSLIAXKLQS 694
L+LFADD VY + + S I +QS
Sbjct: 639 VLSLFADDAAVYSAGFSYSEINQSMQS 665
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 125 bits (301), Expect = 9e-29
Identities = 71/198 (35%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP WK + IHKPGKP+ P SYRPISLL S + ++GI +
Sbjct: 488 FPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEH 547
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H V+Q+HR+ E IL + + Y +LF D+ +AFD+VWH GL K+
Sbjct: 548 QFGFRAGHCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRVWHIGLQLKI-KQT 604
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-- 607
+P +++ +L R F R S+ + AGVPQG +D+P+
Sbjct: 605 LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVS 664
Query: 608 ---PXHLALFADDTTVYY 652
LA FADD V Y
Sbjct: 665 LYGKSMLATFADDVCVTY 682
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 122 bits (293), Expect = 8e-28
Identities = 66/191 (34%), Positives = 96/191 (50%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK++ ++ I KPGK K P+SYRPISLL + L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
+P + +++ +L NR F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 614 HLALFADDTTV 646
+ FADDT +
Sbjct: 661 TTSTFADDTAI 671
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 120 bits (289), Expect = 3e-27
Identities = 69/199 (34%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK A +I IHK GK SYRPISLL S +
Sbjct: 292 FPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKF 351
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K +
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 408
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 409 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 468
Query: 614 H--------LALFADDTTV 646
+A +ADDT V
Sbjct: 469 TEVDEEDVLIATYADDTAV 487
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 119 bits (287), Expect = 4e-27
Identities = 65/191 (34%), Positives = 95/191 (49%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK++ ++ I KPGK K P+SYRPISLL + L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
+P + +++ +L N F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 614 HLALFADDTTV 646
+ FADDT +
Sbjct: 661 TTSTFADDTAI 671
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 118 bits (284), Expect = 1e-26
Identities = 68/199 (34%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK A +I IHK GK SYRP SLL S +
Sbjct: 490 FPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKF 549
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K +
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 606
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 607 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 666
Query: 614 H--------LALFADDTTV 646
+A +ADDT V
Sbjct: 667 TEVDEEDVLIATYADDTAV 685
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 117 bits (281), Expect = 2e-26
Identities = 74/203 (36%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 533 YPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLH 592
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 598
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 709
Query: 599 -RSPPXH---LALFADDTTVYYS 655
R P L+ +ADDT V S
Sbjct: 710 YRPSPTERIMLSTYADDTIVLSS 732
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 117 bits (281), Expect = 2e-26
Identities = 66/191 (34%), Positives = 97/191 (50%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK +I I KPGK +SYRPISLL + I+
Sbjct: 486 FPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAH 545
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR +H ++QV+R+T I + Y A+F DV++AFDKVW +GL+FK+ +
Sbjct: 546 QFGFRESHGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFKI-KIS 602
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
+P+S +++ +L +R F R S+ + AGVPQG DIP +
Sbjct: 603 LPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRL 662
Query: 614 HLALFADDTTV 646
++ FADDT +
Sbjct: 663 TVSTFADDTAI 673
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 117 bits (281), Expect = 2e-26
Identities = 74/203 (36%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 545 YPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 604
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 661
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 598
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 721
Query: 599 -RSPPXH---LALFADDTTVYYS 655
R P L+ +ADDT V S
Sbjct: 722 YRPSPTQRIMLSTYADDTIVLSS 744
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 114 bits (275), Expect = 1e-25
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 417 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 476
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 533
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 593
Query: 611 XH--------LALFADDTTVYYS 655
H L+ +ADDT V S
Sbjct: 594 YHPSPTERIMLSTYADDTIVLSS 616
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 114 bits (275), Expect = 1e-25
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 611 XH--------LALFADDTTVYYS 655
H L+ +ADDT V S
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSS 732
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 114 bits (275), Expect = 1e-25
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 611 XH--------LALFADDTTVYYS 655
H L+ +ADDT V S
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSS 732
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 114 bits (275), Expect = 1e-25
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 495 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 554
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 611
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 671
Query: 611 XH--------LALFADDTTVYYS 655
H L+ +ADDT V S
Sbjct: 672 YHPSPTERIMLSTYADDTIVLSS 694
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 114 bits (275), Expect = 1e-25
Identities = 73/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
+P WK A V I KPGK N P SYRPISLL K +
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 434 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 611 XH--------LALFADDTTVYYS 655
H L+ +ADDT V S
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSS 732
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 114 bits (274), Expect = 2e-25
Identities = 66/191 (34%), Positives = 95/191 (49%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK++ +I I KP K K P SYRPISLL + + L
Sbjct: 26 FPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSY 84
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 433
QF F H ++QV+R+T I + Y ALF DVA+AFD+VW +GL+FK+ +
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKIIQL- 141
Query: 434 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPX 613
+P ++ +++ +L R F R + SS + AGVPQG DIP +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 614 HLALFADDTTV 646
+ FADDT +
Sbjct: 202 TIFTFADDTAI 212
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 111 bits (266), Expect = 2e-24
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 62 RTVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI 241
RT FP WK A + I KPGK SYRPISLL D S
Sbjct: 85 RTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKA 144
Query: 242 LIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 421
+ QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 145 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 202
Query: 422 FNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 598
+ +P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 203 SRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 261
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 111 bits (266), Expect = 2e-24
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 62 RTVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI 241
RT FP WK A + I KPGK SYRPISLL D S
Sbjct: 532 RTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKA 591
Query: 242 LIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 421
+ QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
Query: 422 FNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 598
+ +P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 650 SRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 111 bits (266), Expect = 2e-24
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 62 RTVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI 241
RT FP WK A + I KPGK SYRPISLL D S
Sbjct: 532 RTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKA 591
Query: 242 LIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 421
+ QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
Query: 422 FNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 598
+ +P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 650 SRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 111 bits (266), Expect = 2e-24
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 62 RTVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI 241
RT FP WK A + I KPGK SYRPISLL D S
Sbjct: 532 RTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKA 591
Query: 242 LIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKL 421
+ QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKL 649
Query: 422 FNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 598
+ +P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 650 SRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 95.1 bits (226), Expect = 1e-19
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Frame = +2
Query: 65 TVSFPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGIL 244
T +P W+ A +I I KP KP + SYRPISLL F+ ++
Sbjct: 485 TGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLI 544
Query: 245 IDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLF 424
Q F++NHS + + R+ L+ + L D +AFD+V + ++ +L
Sbjct: 545 SHNQVAFKSNHSTMDALLRIQHFASNALSTKN--HVSILATDFERAFDRVGIHAVLCRLE 602
Query: 425 NMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDI--- 595
G+ L +I+ F++NRSFR R+ S+ L G+PQG DI
Sbjct: 603 RWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDI 662
Query: 596 -PRSPPXHLALFADDTTVYYSXXNXSLIAXK 685
R +++L+ADD ++ N + + K
Sbjct: 663 VTRHKDIYISLYADDAIIFTKIKNINTVREK 693
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 69.3 bits (162), Expect = 6e-12
Identities = 47/158 (29%), Positives = 76/158 (48%)
Frame = +2
Query: 77 PRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQ 256
P+ +K + +I I KP K +SYRPISL V+ ++ D+Q
Sbjct: 484 PQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQ 543
Query: 257 FGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGV 436
FGF+ S + L L+ ++ ++T + D ++AFD+V + +I +L
Sbjct: 544 FGFKKGKSTSDCL--LYVDYLITKSK---MHTSLVTLDFSRAFDRVGVHSIIQQLQEWKT 598
Query: 437 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 550
++ I++F+SNR RV SSP PL G+PQG
Sbjct: 599 GPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 58.8 bits (136), Expect = 9e-09
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Frame = +2
Query: 74 FPRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDE 253
FP+ WK+ ++ + K P N P SYRP+ LL S L +
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQ 513
Query: 254 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPL-----YTGALFFDVAKAFDKVWHNGLIFK 418
Q+GFR S + + +T+ L+ + L Y + DV AF+ ++
Sbjct: 514 QYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGA 573
Query: 419 LFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQG 550
+ N+GVPD + +I ++ +R Y E G RS ++AGVPQG
Sbjct: 574 MRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQG 616
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.88
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 504 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 325
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 324 PT 319
PT
Sbjct: 89 PT 90
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.88
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 504 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 325
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 324 PT 319
PT
Sbjct: 89 PT 90
>AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p
protein.
Length = 860
Score = 26.6 bits (56), Expect(2) = 5.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 570 RRGERTEPCGTPA-VRGRGEERVPSTRYRK-ERFDKKSRMMSTRLSGTPMLNSLKIKPLC 397
R+GE+ G P+ R + V +T K ++ +K +++ LSG L K+KPL
Sbjct: 468 RKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGLKELEIGKLKPLP 527
Query: 396 QTLSNAFATSKK 361
+ N T ++
Sbjct: 528 SSSKNPVLTHRR 539
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 270 VRNPNCSSIRMPLDETK 220
+R P+CSS D+TK
Sbjct: 545 IRTPSCSSSEASDDDTK 561
>AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconventional
myosin 95E isoformII protein.
Length = 1258
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconventional
myosin 95E isoformI protein.
Length = 1278
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AE014297-3479|AAZ52543.1| 464|Drosophila melanogaster CG5501-PG,
isoform G protein.
Length = 464
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AE014297-3478|AAZ52542.1| 464|Drosophila melanogaster CG5501-PF,
isoform F protein.
Length = 464
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE,
isoform E protein.
Length = 1288
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD,
isoform D protein.
Length = 1278
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
>AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB,
isoform B protein.
Length = 1258
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 462 GTSCRTALFDIESREPAPPH--DLSQLESRKALSSHPSYLAYSSTIFPGRRRXI*LYSPT 635
G++CR + + PA PH S L + + S P S++ G + I LY
Sbjct: 296 GSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPERERDRSSLM-GSTQRISLYD-A 353
Query: 636 TRLFTILXXIXP*SPXSFRAQPXPLXQWXRKWRININPTEKYWRCYSXGE 785
+L +L + P P S P R+ + +PT++ C + +
Sbjct: 354 HKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHK---SPTQRMRECVTCAD 400
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,558,310
Number of Sequences: 53049
Number of extensions: 729992
Number of successful extensions: 2087
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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