Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G09
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 73 3e-13
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 48 9e-06
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 48 9e-06
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 48 9e-06
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.037
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 31 1.1
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 31 1.1
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 1.1
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 72.9 bits (171), Expect = 3e-13
Identities = 60/207 (28%), Positives = 82/207 (39%), Gaps = 2/207 (0%)
Frame = +2
Query: 77 PRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQ 256
P WK+A+VI I KP K +SYRPISLL + + S Q
Sbjct: 381 PDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIESPA----HQ 436
Query: 257 FGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGAL-FFDVAKAFDKVWHNGLIFKLFN-M 430
GF+ HS V ++T I+ GLN P + D+ AFDKV L L
Sbjct: 437 HGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQ 496
Query: 431 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 610
G+ + L + ++L R R + S L GVPQG D+P
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQD 556
Query: 611 XHLALFADDTTVYYSXXNXSLIAXKLQ 691
L +ADD ++ A K+Q
Sbjct: 557 TMLISYADDMSIIARDKKIEKAAEKVQ 583
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +2
Query: 359 LFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 538
++ D +KAFD++ H+ L+ KL ++ +L++ + +FLSNRSFR R+ T SS + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 539 VPQGXXXXXXXXXXXXNDIPRSPPXHLAL--FADDTTVYYS 655
VPQG NDI P +A FADDT +Y S
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS 117
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 48.0 bits (109), Expect = 9e-06
Identities = 43/158 (27%), Positives = 64/158 (40%)
Frame = +2
Query: 77 PRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQ 256
P+ WK + I K G +N +YRPI LL + + EQ
Sbjct: 600 PKPWKTSKTTLIFKKGDRENLE-NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQ 656
Query: 257 FGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGV 436
GFR + S + +H L + VG PL +F D KAFD V H + L G
Sbjct: 657 AGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQGA 714
Query: 437 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 550
+ + ++++ N + + R P+T GV QG
Sbjct: 715 DGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 751
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 48.0 bits (109), Expect = 9e-06
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 377 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 553
KAFD+V H+ L+ KL + G+ DFLS+R+F +V + P+++GVP+G
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 554 XXXXXXXXXXXNDIPRSPPXHL--ALFADDTTVY 649
N + S P + + FADD VY
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 48.0 bits (109), Expect = 9e-06
Identities = 43/158 (27%), Positives = 64/158 (40%)
Frame = +2
Query: 77 PRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQ 256
P+ WK + I K G +N +YRPI LL + + EQ
Sbjct: 339 PKPWKTSKTTLIFKKGDRENLE-NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQ 395
Query: 257 FGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGV 436
GFR + S + +H L + VG PL +F D KAFD V H + L G
Sbjct: 396 AGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQGA 453
Query: 437 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 550
+ + ++++ N + + R P+T GV QG
Sbjct: 454 DGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 490
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 47.6 bits (108), Expect = 1e-05
Identities = 43/158 (27%), Positives = 64/158 (40%)
Frame = +2
Query: 77 PRLWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQ 256
P+ WK + I K G +N +YRPI LL + + EQ
Sbjct: 429 PKPWKTSKTTLIFKKGDRENLE-NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQ 485
Query: 257 FGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGV 436
GFR + S + +H L + VG PL +F D KAFD V H + L G
Sbjct: 486 AGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDTVEHQAIWKSLDEQGA 543
Query: 437 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 550
+ + ++++ N + + R P+T GV QG
Sbjct: 544 DGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 580
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3
Query: 594 ISLTNKLNRRGERTEPCGTPAVRGRGEER 508
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 624 KAKWXGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 448
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 447 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 358
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 624 KAKWXGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 448
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 447 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 358
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 624 KAKWXGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 448
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 447 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 358
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 624 KAKWXGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 448
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 447 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 358
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 359 LFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 538
+F D KAFD V H + L G ++ + ++++ N + + R P+T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 539 VPQG 550
V QG
Sbjct: 99 VRQG 102
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 447 SCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSSTIFP 599
SCSS +S +A I S+E PP L + S++ S + SS + P
Sbjct: 37 SCSSSASSSSSAAKRIRSQEDGPPSKRWVLSASSTSSTNKSPIPSSSPVLP 87
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 428 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 532
+ +PD ++I R+ R V GT+SSP PLT
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLT 439
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,741,215
Number of Sequences: 27780
Number of extensions: 361455
Number of successful extensions: 898
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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