Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G08
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185 32 0.69
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.91
06_03_0854 + 25400855-25403741,25406174-25407708 31 1.2
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 31 1.6
02_05_0625 + 30453521-30453890,30454215-30454352,30454458-304547... 30 2.1
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 30 2.8
04_03_1017 + 21747044-21748051 30 2.8
11_04_0353 + 16690594-16691502 29 3.7
09_04_0379 - 17094540-17094868,17095354-17095717 29 3.7
03_05_0750 - 27383848-27383940,27384016-27384137,27384525-273845... 29 3.7
01_06_1377 + 36764461-36765339 29 4.9
09_03_0006 + 11426346-11426420,11426733-11427452 29 6.4
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 29 6.4
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 29 6.4
05_02_0165 - 7256178-7256444 29 6.4
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 29 6.4
10_08_0815 + 20782834-20782996,20783062-20783144,20783227-207832... 28 8.5
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538... 28 8.5
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 28 8.5
08_01_0982 - 9947192-9947474,9948649-9948950 28 8.5
08_01_0585 + 5187545-5187961 28 8.5
07_03_0565 - 19561078-19561425,19562253-19563746 28 8.5
07_03_0275 - 16160467-16160555,16160695-16160764,16160860-161609... 28 8.5
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 28 8.5
>09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185
Length = 248
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 246 ALTRKNVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRXE 419
AL VA+L P+ VR + G V + L AP L AL+ DY+W+ E
Sbjct: 2 ALPTATVASL--PELRALVREVVGECRVQVRSVAALRDAPEMYLALSALSVDYQWQVE 57
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 31.5 bits (68), Expect = 0.91
Identities = 32/115 (27%), Positives = 50/115 (43%)
Frame = -2
Query: 635 MAGQHLRQPXGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNY 456
+AG H GEA+A AA + D DG EA +R RP+L+ PP
Sbjct: 156 LAGAH-DDVGGEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGR 209
Query: 455 SFAGAPFPXRAKLXTPPVIGSERLRLQVPGWRPGEQARRLEGDSAVSSDRPDRDR 291
S + P +A+ +P + G +R P WR ++ R++ + P +R
Sbjct: 210 SRGRSRHPRKAESTSPSISGGDRGSRSGP-WRQLKRWRKVASRAVQRKSLPAGER 263
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 297 RSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVS 184
R R AD A S G GRG P +V APPP + +
Sbjct: 584 RGRVADAAIAGGSRGRGRGCGLTPAVVTVGAPPPPSAA 621
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 536 AGRRVRQAARPRLQHGPP-RLEPPRSNYSFAGAP 438
AG+ R RP+ QH PP R PPR ++ + P
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKP 116
>02_05_0625 +
30453521-30453890,30454215-30454352,30454458-30454727,
30454844-30454983,30455067-30455213,30455319-30456008
Length = 584
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +2
Query: 35 RNSGSR-EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVXLXETLEGGGAV 211
R G R + M LS+ + ++ +L KI++ + LL+ NT+K L GGGA
Sbjct: 380 RELGHRVKTMTRLSSQNILSEVHFAAEQLQKKIDQKSYLLV-NTEKWQALIRR-HGGGAK 437
Query: 212 D-GTIRGSRMVPRPDPQERRGA-ATSAARDRGQGDPR 316
D G + G R + P + + A+S + PR
Sbjct: 438 DGGLVPGRRAIASPGAVHKSSSFASSTSHSSLNSAPR 474
>06_03_0606 - 22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Frame = +1
Query: 304 GRSEDTALSPSRRRAC--SPGRHPGTWRRRRSLPIT-----GGVXSFALXGKGAPAXE*F 462
GR+ L+P RA R G RR P T GG + A A
Sbjct: 1266 GRAAPATLAPWSMRAAPAEARRQKGFNGGRRGAPATLAPRSGGAPAVARRQNRAKILRGE 1325
Query: 463 ERGGSNLGG---PCWRRGL 510
+ GG+ GG PCWRRG+
Sbjct: 1326 KVGGARRGGARQPCWRRGM 1344
>04_03_1017 + 21747044-21748051
Length = 335
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 286 SARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLP 399
S R+ + + T SP RRRA SP P T RR + P
Sbjct: 168 SRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASP 205
>11_04_0353 + 16690594-16691502
Length = 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 245 RPDPQERRGAATSAARDRGQGDPRIPHC 328
R P RRG T+AA G GD R P C
Sbjct: 275 RIPPASRRGNGTAAAGGAGAGDGRRPFC 302
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 625 NICVSRKVRHPRXRPTQSARTGRTASTVRRPADG 524
N + R++RH +PT AR G + +PA G
Sbjct: 176 NRAIPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>03_05_0750 -
27383848-27383940,27384016-27384137,27384525-27384578,
27384682-27384783,27386838-27387087
Length = 206
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTW 378
SRRCD SA G + S +RRRAC R W
Sbjct: 31 SRRCDAVSAVG--GANSGNGWSKARRRACGSSRERDGW 66
>01_06_1377 + 36764461-36765339
Length = 292
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 611 PXGEASAVAAHPVRENRADRLDGTEAGR-RVRQAARPRLQHGP-PRLEPPRSNYSFAGAP 438
P ASA+ P+ R G G+ R+R A R R P P+ PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 437 FPXRAKLXTPPVIGSER 387
P PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 241 ATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR---SLPITGG 411
A P + + R C +R S P+ RR C+ RH RRR SL +TG
Sbjct: 37 AAPPASSSQRHCAIRPVPPSSFSRRRRRRPPALRRCCAAWRHRTRKRRRTRLCSLLVTGV 96
Query: 412 V 414
V
Sbjct: 97 V 97
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = -2
Query: 596 SAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPXRAKL 417
+A AA P R A+ T+ R R +ARP PPR S GA R L
Sbjct: 9 AAAAAFPFRLFSAEARRNTKGSRSKRGSARPLKPSPPPRPSASSSAAGGGGATTFTRLPL 68
Query: 416 XTPP 405
P
Sbjct: 69 RNAP 72
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQ 495
HLR P G A A A ++ R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQSC--RVDGGELGRLVSSPQCPRLE 146
>05_02_0165 - 7256178-7256444
Length = 88
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 319 TALSPSRRRACSPGRHPGTWRRRR 390
T + PS +R G+HPGT R R+
Sbjct: 51 TCIKPSEQRVREAGKHPGTARYRK 74
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 395 SERLRLQVPGWRPGEQA---RRLEGDSAVSSDRPDRDRALRTSQRR 267
SER+ ++ G++ A RR D V + DRDRAL+ +RR
Sbjct: 6 SERMGIRQKGYKASMDAAEGRRRREDITVILRKADRDRALKEKRRR 51
>10_08_0815 +
20782834-20782996,20783062-20783144,20783227-20783268,
20783426-20783467,20783805-20783888,20784065-20784152,
20784276-20784373,20785475-20785519,20785622-20785698,
20785917-20786001,20786346-20786486
Length = 315
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +1
Query: 241 ATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGV 414
ATP R + RSRS R+ L+P RRR GR WR RS P GV
Sbjct: 6 ATPVLLLLRRSATILLPRSRSPRASACVLAPQRRR----GRR---WRLLRSSPPPEGV 56
>10_07_0109 +
12952293-12952952,12953049-12953402,12953494-12953816,
12953939-12954062
Length = 486
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 364 GAPASKHAASKETVRYPRIALTAIARCGRRSAATFLRVRAWHH 236
GA H+A+K + + IA C S A R+RAWHH
Sbjct: 292 GADVVLHSATKYIAGHHDV----IAGCVSGSEALISRIRAWHH 330
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 364 GAPASKHAASKETVRYPRIALTAIARCGRRSAATFLRVRAWHH 236
GA H+A+K + + IA C S A R+RAWHH
Sbjct: 278 GADVVLHSATKYIAGHHDV----IAGCVSGSEALISRIRAWHH 316
>08_01_0982 - 9947192-9947474,9948649-9948950
Length = 194
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 194 EGGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGD 310
+GGG D GS PR + +RR +SAA G D
Sbjct: 25 DGGGLRDNLGYGSGSFPREETGQRRATLSSAAGGNGVQD 63
>08_01_0585 + 5187545-5187961
Length = 138
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = +1
Query: 232 PYGATP*PARTSRRCDVRSARSRSGRSEDTALSPS---RRRACSPGRHPGTWRRRR 390
P P P +SRR + R + E P+ RRR C G PG R+R
Sbjct: 67 PSSRRPDPTLSSRRLAAKRRRPHAAIEERRRPRPAAAERRRPCVAGGRPGKKERKR 122
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 331 PSRRRACSPGRHPGTWRRRR-SLPITGGVXSFALXGKGAPAXE*FERGGSNLGGPCWR 501
P RR +P H T +RRR S+ + + + A G+G F R + GG W+
Sbjct: 385 PGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGV--FGRHATTTGGARWK 440
>07_03_0275 -
16160467-16160555,16160695-16160764,16160860-16160940,
16161160-16161252,16161430-16161510,16161605-16161694,
16161812-16161905,16162063-16162131,16162205-16162275,
16162545-16162628,16162755-16162847,16162995-16163102,
16163297-16163447,16164026-16164297,16165213-16165218,
16165389-16165613
Length = 558
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/99 (26%), Positives = 39/99 (39%)
Frame = -2
Query: 548 DGTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGAPFPXRAKLXTPPVIGSERLRLQVP 369
DG AGRR R+ RP + + A +P A T P+ + + V
Sbjct: 100 DGGAAGRRRRRRGRPVVAVPTAAGRGRGRGGAVAASPPTEEAVQMTEPLTKEDLMAYLVS 159
Query: 368 GWRPGEQARRLEGDSAVSSDRPDRDRALRTSQRRDVLAG 252
G +P E R+ + D R ++ Q RD+L G
Sbjct: 160 GCKPKEN-WRIGTEHEKFGFEVDTLRPIKYDQIRDILNG 197
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 28.3 bits (60), Expect = 8.5
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 23 KSKERNSGSREVMRELSTSDTTFTLNPDT--NELATKIEEHTNLLLENTKKMVXLXETLE 196
++K+R + E +RE + NP+ EL + E ++ + + ++ + +T
Sbjct: 408 RAKQRRA-EEEALREKQEEERRLE-NPELYLEELRARYSELSDRVDQRKRQKLNGGKTNG 465
Query: 197 GGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGD 310
+ G RG R+ +ER TSAA DRG+G+
Sbjct: 466 NHNSSGGVGRGERL--NAAQKERMRLLTSAAFDRGKGE 501
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,968,691
Number of Sequences: 37544
Number of extensions: 447165
Number of successful extensions: 2326
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2324
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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