Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G08
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 34 0.77
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 34 0.77
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 34 0.77
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 34 0.77
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 34 0.77
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein. 34 0.77
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 34 0.77
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 34 0.77
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 34 0.77
BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein. 33 1.4
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 32 2.4
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 32 2.4
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 32 2.4
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 32 2.4
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 32 2.4
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 32 2.4
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 32 2.4
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 32 2.4
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 32 2.4
U15008-1|AAC13776.1| 118|Homo sapiens Sm D2 protein. 32 3.1
BC001930-1|AAH01930.1| 118|Homo sapiens small nuclear ribonucle... 32 3.1
BC000486-1|AAH00486.1| 118|Homo sapiens small nuclear ribonucle... 32 3.1
AC007191-2|AAD22673.1| 118|Homo sapiens SMD2_HUMAN protein. 32 3.1
BC014233-1|AAH14233.2| 235|Homo sapiens MGC20647 protein protein. 31 4.1
BC008289-1|AAH08289.1| 240|Homo sapiens MGC20647 protein protein. 31 4.1
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 31 4.1
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel... 31 4.1
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 31 5.5
BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. 31 5.5
BC022570-1|AAH22570.1| 224|Homo sapiens MGC27121 gene protein. 31 5.5
M74547-1|AAA36397.1| 935|Homo sapiens p107 protein. 31 7.2
L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein. 31 7.2
BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 7.2
AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens ... 31 7.2
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 30 9.5
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 237 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 296
Query: 464 SN 459
+
Sbjct: 297 ED 298
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRS 393
SRRC S+ S S S ++ S SR R+ SP + RRRRS
Sbjct: 1356 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRS 1398
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein.
Length = 181
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 54 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 113
Query: 464 SN 459
+
Sbjct: 114 ED 115
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein.
Length = 1516
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 321 GILGSP*PRSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVSXS 178
G L SP + A AAP + S E PS+APPPSN S S
Sbjct: 1411 GPLPSPASATATAAPAAPEDAATSAAAAPGEGPAAPSSAPPPSNSSSS 1458
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVXS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 796
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVXS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 796
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 481 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 522
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 443 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 484
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVXS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 256 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 311
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1478 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1519
>U15008-1|AAC13776.1| 118|Homo sapiens Sm D2 protein.
Length = 118
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC001930-1|AAH01930.1| 118|Homo sapiens small nuclear
ribonucleoprotein D2 polypeptide 16.5kDa protein.
Length = 118
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC000486-1|AAH00486.1| 118|Homo sapiens small nuclear
ribonucleoprotein D2 polypeptide 16.5kDa protein.
Length = 118
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>AC007191-2|AAD22673.1| 118|Homo sapiens SMD2_HUMAN protein.
Length = 118
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC014233-1|AAH14233.2| 235|Homo sapiens MGC20647 protein protein.
Length = 235
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 RGWCGRW-HYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPG 372
RG CG W H L G P P +R V R G +PS RRA GR G
Sbjct: 90 RGACGAWDHVPALAPGRHPAPPVAARAPQVFVCLRRVGVRLALPSAPSCRRAPQRGREAG 149
Query: 373 TWR 381
R
Sbjct: 150 AGR 152
>BC008289-1|AAH08289.1| 240|Homo sapiens MGC20647 protein protein.
Length = 240
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 RGWCGRW-HYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPG 372
RG CG W H L G P P +R V R G +PS RRA GR G
Sbjct: 95 RGACGAWDHVPALAPGRHPAPPVAARAPQVFVCLRRVGVRLALPSAPSCRRAPQRGREAG 154
Query: 373 TWR 381
R
Sbjct: 155 AGR 157
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 289 ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVXS 420
+RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 785 SRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 828
>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1520
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -2
Query: 398 GSERLRLQVPGWRPGEQARRLEGDSAVSSDRPDRDRALRTSQRRDVLAGQ 249
G+ R L+ PG P R L+GDSA R+ A RT RR AG+
Sbjct: 1464 GTPRCALRTPGEEPPPPTRALKGDSA-RRGCSAREYARRTRGRRSPAAGR 1512
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPXGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPP PR
Sbjct: 193 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPLQRQPR 252
Query: 464 SN 459
+
Sbjct: 253 ED 254
>BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein.
Length = 369
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 491 GPPR-LEPPRSNYSFAGAPFPXRAKLXTPPVIGSERLRLQVPGWRPGEQAR 342
GP R L PP + F G P P A+L TPP + +R VP P +Q R
Sbjct: 165 GPVRFLGPPAAVQLFRG-PTPSPAELPTPPEMVCKRKGAGVPACTPCKQPR 214
>BC022570-1|AAH22570.1| 224|Homo sapiens MGC27121 gene protein.
Length = 224
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 185 ETLEGGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGDPR--IPHC 328
E L+G V+ + SR DP+ + A + A RG GDP +PHC
Sbjct: 173 EDLQGLPLVEMPRKNSRDGAELDPEANQDAPDAGALQRGGGDPPAILPHC 222
>M74547-1|AAA36397.1| 935|Homo sapiens p107 protein.
Length = 935
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 603 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 659
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 660 RKVYHLASVRLRDLCLKLDVSNELRRKIW 688
>L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein.
Length = 1068
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 30.7 bits (66), Expect = 7.2
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 PASKHAASKETVRYPRIALTAIARCGRRSAATFL-RVRAWHHTGAPYSAIDRTTPFQRFX 182
P S + + V+ P ++LTA + G T L + + H TG + RT F
Sbjct: 736 PLSMNTNQESKVKSP-VSLTAHSLIGASPKQTNLTKAQEVHSTGI--NRPKRTGSLALFY 792
Query: 181 -KLYHFFSVLQQQVCMFLDFSRQFIR-VW 101
K+YH SV + +C+ LD S + R +W
Sbjct: 793 RKVYHLASVRLRDLCLKLDVSNELRRKIW 821
>AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ41974 fis, clone SKNMC2005772. ).
Length = 132
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 400 ITGGVXSFALXGKGAPAXE*FERG---GSNLGGPCWR-RGLAAW 519
+TG S A G+ P+ F+RG S L G CW+ R A+W
Sbjct: 75 VTGPACSIAWAGRSPPSRWIFQRGLTATSTLPGSCWKGRSSASW 118
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 545 GTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGA 441
G +A RR RQ AR PP L R +Y F G+
Sbjct: 3307 GLQASRRSRQPARHPACMLPPHLRTTRDSYQFGGS 3341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,580,187
Number of Sequences: 237096
Number of extensions: 2192939
Number of successful extensions: 7572
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 6783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7549
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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