Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_G08
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical...    32   0.62 
AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical...    32   0.62 
AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical...    32   0.62 
AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical ...    32   0.62 
AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical ...    32   0.62 
AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical ...    32   0.62 
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z50857-6|CAA90720.1|  283|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z50806-6|CAA90692.1|  283|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    29   5.7  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AF000263-12|AAO21392.1|  838|Caenorhabditis elegans Hypothetical
           protein T08B2.5f protein.
          Length = 838

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 27  AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 69


>AF000263-11|AAL77184.1|  866|Caenorhabditis elegans Hypothetical
           protein T08B2.5c protein.
          Length = 866

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 55  AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 97


>AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical
           protein T08B2.5d protein.
          Length = 163

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 113 AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 155


>AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical
           protein T08B2.5e protein.
          Length = 184

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 134 AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 176


>AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical
           protein T08B2.5a protein.
          Length = 924

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 113 AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 155


>AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical
           protein T08B2.5b protein.
          Length = 925

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/45 (46%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 ARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
           AR +RR   RS   R GRS     SPSRRR     R   + RRRR
Sbjct: 114 AREARRSRSRSRDRRGGRSRSR--SPSRRRTSRDRRDDRSSRRRR 156


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +1

Query: 247 P*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRS 393
           P P R   R     A  R  RS   + SP+ RR  SP + P   RRRRS
Sbjct: 422 PAPKRAKSRSKSPPAPRRR-RSPSQSKSPAPRRRRSPSKSPQAPRRRRS 469


>Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical
           protein C34B7.4 protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = -2

Query: 659 ERYPAKTTMAGQHLRQPXGEASAVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHG 489
           ++ P+ ++   ++LR+P  + +  ++ P+  ++ +RLD TE         R  L+HG
Sbjct: 32  QQTPSSSSSKRKNLRKPSTDDTPSSSEPL--SKKNRLDSTETAEEDNTRRRRTLKHG 86


>Z50857-6|CAA90720.1|  283|Caenorhabditis elegans Hypothetical
           protein M79.2 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = -2

Query: 701 QWXXXAVGSLXGYFERYPAKTTMAGQHLRQPXGEASAVAAHPVRENRADRLDGTEAG 531
           QW    V  + GYF R   + T   +   +   E S   A  + E R  R+  T+ G
Sbjct: 77  QWYLHVVAMIQGYFPREKLENTYENEESEEQRSEKS---ADQIAEERVKRIIDTDLG 130


>Z50806-6|CAA90692.1|  283|Caenorhabditis elegans Hypothetical
           protein M79.2 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = -2

Query: 701 QWXXXAVGSLXGYFERYPAKTTMAGQHLRQPXGEASAVAAHPVRENRADRLDGTEAG 531
           QW    V  + GYF R   + T   +   +   E S   A  + E R  R+  T+ G
Sbjct: 77  QWYLHVVAMIQGYFPREKLENTYENEESEEQRSEKS---ADQIAEERVKRIIDTDLG 130


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 201 VVRSMALYGAPVWCHALTRKNVAALRRPQRAIAVRAIRG 317
           +++  ALYGAP W   L+  N+  L    R+ A+RA  G
Sbjct: 689 LIKPTALYGAPAWTSLLSDTNLEKLEIAYRS-ALRACVG 726


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = -2

Query: 488 PPRLEP----PRSNYSFAGAPFPXRAKLXTPPVIGSERLRLQVPGWRPGEQARRLEGDSA 321
           PPR  P    P   Y   GAP+    ++  PP++    +    PG  P E A + +  +A
Sbjct: 118 PPRHHPGYPHPAYGYPPPGAPYGYPPQMMRPPMMAPGDMVRMPPGPTPTEWAAQQQAQAA 177

Query: 320 VSSDRP 303
             S  P
Sbjct: 178 SRSVPP 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,750,777
Number of Sequences: 27780
Number of extensions: 298782
Number of successful extensions: 1177
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)