Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G04
(859 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 4e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 1e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 4e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 1e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 46 3e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 40 3e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 37 2e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 4e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.024
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.024
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 3.6
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.6 bits (133), Expect = 1e-10
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 KFG 542
KFG
Sbjct: 168 KFG 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
V W + + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 4e-10
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 362
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 539
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 540 G 542
G
Sbjct: 164 G 164
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V++NGS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 534 KFG 542
K G
Sbjct: 170 KLG 172
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.8 bits (126), Expect = 1e-09
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G VSW + + ++ +P D Q+C KFG
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFG 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V+++GS ++ + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.6 bits (123), Expect = 2e-09
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +3
Query: 162 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 336 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 503
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 504 WPNDMQTCTFKFG 542
+P D QTC KFG
Sbjct: 152 FPFDEQTCFMKFG 164
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
G Y V+++GS ++ + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
++ + + + +P D Q C KFG
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 539
+L N A + VS+ G V W+ + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.8 bits (116), Expect = 2e-08
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 404
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
R+ +G V + RL I M L+N+P D Q C +FG
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.4 bits (105), Expect = 3e-07
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Frame = +3
Query: 177 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV 344
LP H K VV + +R + E + + + +W D RL + S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 345 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 515
ER+WRPD N + + R+S +G + + RL I M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 516 MQTCTFKFG 542
Q+C G
Sbjct: 173 RQSCPLILG 181
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Frame = +3
Query: 192 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLW 362
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 363 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 534 KFG 542
FG
Sbjct: 186 NFG 188
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 41.5 bits (93), Expect = 1e-05
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVV 377
++ L ++H N+ E TV L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 378 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCT 530
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.9 bits (89), Expect = 3e-05
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 198 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 368
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 369 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 536
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.1 bits (82), Expect = 2e-04
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +3
Query: 285 WIDKRLXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 449
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFK 536
+ R+ ++ M L +P D Q C+ +
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 285 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.003
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMQTCTF 533
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.003
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMQTCTF 533
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.5 bits (73), Expect = 0.003
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Frame = +3
Query: 144 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 317
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 318 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 491
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 492 QLDNWPNDMQTCTF 533
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.024
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 195 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 368
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.3 bits (65), Expect = 0.024
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +3
Query: 243 SESTVRILAD--LQMNWIDKRLXW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 410
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 411 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
++ + ++ ++ ++ +L + +M+ +++P+D Q C+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 515
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MQTC 527
+Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TC 527
C
Sbjct: 176 EC 177
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.0 bits (47), Expect = 3.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 553 HNSDXMDFVIDKRXYPMFXSXAWDVTXSVQCGCXPRTG 666
H S MDF +++ YP F D Q G TG
Sbjct: 362 HQSFGMDFSLNEDFYPTFNQTNVDQYLYNQTGPLSSTG 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,485
Number of Sequences: 438
Number of extensions: 5092
Number of successful extensions: 79
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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