Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_G03
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010107-1|AAQ22576.1| 1287|Drosophila melanogaster GH05223p pro...    31   2.7  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    31   2.7  
AE014134-187|AAF51431.3| 1288|Drosophila melanogaster CG31795-PB...    31   2.7  
AY058476-1|AAL13705.1|  976|Drosophila melanogaster GH28062p pro...    29   8.1  
AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodom...    29   8.1  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.1  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.1  
AE014135-103|AAF59330.2| 1081|Drosophila melanogaster CG1922-PA ...    29   8.1  

>BT010107-1|AAQ22576.1| 1287|Drosophila melanogaster GH05223p
           protein.
          Length = 1287

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 523 YASSHPPLRSRLHQPDH---QXPEFHTPTTPELNIHFHQSP 636
           ++   PP   +  Q D    Q P+ H P+TP+ ++H H+SP
Sbjct: 42  WSKQRPPFDQQQQQEDQDPEQDPQQH-PSTPQESVHHHRSP 81


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = +1

Query: 511 RSRPYASSHPPLRSRLHQPDH---QXPEFHTPTTPELNIHFHQSP 636
           R   Y + H P  S  H P H   Q P    P  P+  IH H  P
Sbjct: 5   RHHEYQTHHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPP 49


>AE014134-187|AAF51431.3| 1288|Drosophila melanogaster CG31795-PB,
           isoform B protein.
          Length = 1288

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 523 YASSHPPLRSRLHQPDH---QXPEFHTPTTPELNIHFHQSP 636
           ++   PP   +  Q D    Q P+ H P+TP+ ++H H+SP
Sbjct: 42  WSKQRPPFDQQQQQEDQDPEQDPQQH-PSTPQESVHHHRSP 81


>AY058476-1|AAL13705.1|  976|Drosophila melanogaster GH28062p
           protein.
          Length = 976

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/46 (34%), Positives = 17/46 (36%)
 Frame = +1

Query: 589 HTPTTPELNIHFHQSPGRRTTXEFAPGLKPPLSSEAPSAYXXPRHW 726
           H P   EL   FH S  RRT     P         AP+A   P  W
Sbjct: 476 HMPVPAELEARFHISSERRTRLNVPPARGSLSRHLAPNAPICPADW 521


>AF169227-1|AAF25796.1| 1081|Drosophila melanogaster cut-homeodomain
           protein protein.
          Length = 1081

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/46 (34%), Positives = 17/46 (36%)
 Frame = +1

Query: 589 HTPTTPELNIHFHQSPGRRTTXEFAPGLKPPLSSEAPSAYXXPRHW 726
           H P   EL   FH S  RRT     P         AP+A   P  W
Sbjct: 581 HMPVPAELEARFHISSERRTRLNVPPARGSLSRHLAPNAPICPADW 626


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014135-103|AAF59330.2| 1081|Drosophila melanogaster CG1922-PA
           protein.
          Length = 1081

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/46 (34%), Positives = 17/46 (36%)
 Frame = +1

Query: 589 HTPTTPELNIHFHQSPGRRTTXEFAPGLKPPLSSEAPSAYXXPRHW 726
           H P   EL   FH S  RRT     P         AP+A   P  W
Sbjct: 581 HMPVPAELEARFHISSERRTRLNVPPARGSLSRHLAPNAPICPADW 626


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,345,779
Number of Sequences: 53049
Number of extensions: 747693
Number of successful extensions: 2341
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2340
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)