Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_G01
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 32 0.60
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 32 0.60
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 32 0.60
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 32 0.60
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 31 1.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 31 1.4
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.2
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.2
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 4.3
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.3
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 28 9.8
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 28 9.8
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 28 9.8
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 558 YINPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSP 665
Y +PI + P S+HQP P + + F SP + ++P
Sbjct: 47 YSSPIHQPPTSLHQPIPMMQNQFKASPPQSDQETAP 82
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 558 YINPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSP 665
Y +PI + P S+HQP P + + F SP + ++P
Sbjct: 44 YSSPIHQPPTSLHQPIPMMQNQFKASPPQSDQETAP 79
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 558 YINPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSP 665
Y +PI + P S+HQP P + + F SP + ++P
Sbjct: 53 YSSPIHQPPTSLHQPIPMMQNQFKASPPQSDQETAP 88
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 558 YINPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSP 665
Y +PI + P S+HQP P + + F SP + ++P
Sbjct: 46 YSSPIHQPPTSLHQPIPMMQNQFKASPPQSDQETAP 81
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 600 PPPXLTSIFHQSPEXRTKXSSPPGLSLRCHXKAPSXYXTP 719
PPP L S+F SP+ + PP S H AP TP
Sbjct: 1243 PPPAL-SVFQHSPQGAPITAPPPASSHHEHIAAPQARFTP 1281
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 600 PPPXLTSIFHQSPEXRTKXSSPPGLSLRCHXKAPSXYXTP 719
PPP L S+F SP+ + PP S H AP TP
Sbjct: 1263 PPPAL-SVFQHSPQGAPITAPPPASSHHEHIAAPQARFTP 1301
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 359
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 561 INPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSPP 668
I P K+PN + +PPP + + P T+ +PP
Sbjct: 81 IRPATKAPNRMRRPPPRKLAQTPRPPVVTTQRPAPP 116
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 561 INPIIKSPNSIHQPPPXLTSIFHQSPEXRTKXSSPP 668
I P K+PN + +PPP + + P T+ +PP
Sbjct: 81 IRPATKAPNRMRRPPPRKLAQTPRPPVVTTQRPAPP 116
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 27.9 bits (59), Expect = 9.8
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Frame = +3
Query: 414 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSI 593
IP T L TTA T N P SS T+G L I P+ +
Sbjct: 316 IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 375
Query: 594 HQPP--PXLTSIFHQSPEXRTKXSS---PPG 671
+ P L+S H+ P T + PPG
Sbjct: 376 NGYPAASQLSSFMHEIPARNTTSVASLLPPG 406
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 27.9 bits (59), Expect = 9.8
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Frame = +3
Query: 414 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSI 593
IP T L TTA T N P SS T+G L I P+ +
Sbjct: 84 IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 143
Query: 594 HQPP--PXLTSIFHQSPEXRTKXSS---PPG 671
+ P L+S H+ P T + PPG
Sbjct: 144 NGYPAASQLSSFMHEIPARNTTSVASLLPPG 174
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 27.9 bits (59), Expect = 9.8
Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Frame = +3
Query: 414 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSI 593
IP T L TTA T N P SS T+G L I P+ +
Sbjct: 316 IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 375
Query: 594 HQPP--PXLTSIFHQSPEXRTKXSS---PPG 671
+ P L+S H+ P T + PPG
Sbjct: 376 NGYPAASQLSSFMHEIPARNTTSVASLLPPG 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,964,594
Number of Sequences: 27780
Number of extensions: 348814
Number of successful extensions: 1016
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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