Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_F23
(873 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 41 4e-05
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 39 2e-04
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 38 3e-04
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 38 4e-04
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 36 0.002
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 5.3
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 45.2 bits (102), Expect = 3e-06
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWP 510
V S+ +WRPD+VL N A G Y + +A V NNG V + S+ ++ +P
Sbjct: 104 VPSDHIWRPDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFP 160
Query: 511 NDMQTCTFKFGS 546
D+QTC K GS
Sbjct: 161 YDVQTCVLKLGS 172
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 42.3 bits (95), Expect = 2e-05
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163
Query: 520 QTCTFKFGS 546
QTC KFGS
Sbjct: 164 QTCVLKFGS 172
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 41.9 bits (94), Expect = 2e-05
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
+ RLW+PDV++ N+A G Y V NNGS + + + + +P D
Sbjct: 83 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142
Query: 520 QTCTFKFGS 546
Q C KFGS
Sbjct: 143 QRCEMKFGS 151
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 41.9 bits (94), Expect = 2e-05
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159
Query: 520 QTCTFKFGS 546
QTC KFGS
Sbjct: 160 QTCVMKFGS 168
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 41.1 bits (92), Expect = 4e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
+ R+W+PDV++ N+A G Y V NNGS + + + + +P D
Sbjct: 115 IPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 174
Query: 520 QTCTFKFGS 546
Q C KFGS
Sbjct: 175 QRCEMKFGS 183
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 40.7 bits (91), Expect = 6e-05
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 520 QTCTFKFGS 546
QTC KFGS
Sbjct: 163 QTCIMKFGS 171
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 338
N+ E ++ L++ W D +L W+ GG+G+ L
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRL 103
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 40.7 bits (91), Expect = 6e-05
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
++ +LW+PDV++ N+A G Y V NNGS + + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 520 QTCTFKFGS 546
Q C KFGS
Sbjct: 160 QHCEMKFGS 168
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 40.7 bits (91), Expect = 6e-05
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 519
++ +LW+PDV++ N+A G Y V NNGS + + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 520 QTCTFKFGS 546
Q C KFGS
Sbjct: 160 QHCEMKFGS 168
Score = 25.8 bits (54), Expect = 1.7
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 306 WNAGGVG 326
WN G
Sbjct: 87 WNDSEYG 93
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 38.7 bits (86), Expect = 2e-04
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 492
G V SE++W PD+VL N G+Y + +A + G V + M
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEM 156
Query: 493 QLDNWPNDMQTCTFKFGS 546
++ +P D QTC KFGS
Sbjct: 157 NVEYFPYDEQTCLMKFGS 174
Score = 26.6 bits (56), Expect = 0.99
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = -1
Query: 603 ILYILLSITKSIWSLLCIPRTELERASLHVVGPIV 499
+L+ ++ ++ S+W+ +C+ S H + P V
Sbjct: 312 LLFTMILVSLSVWTTVCVLNVWYRSTSTHKMSPFV 346
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 38.3 bits (85), Expect = 3e-04
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTP 483
E+G T L V SE +W PD+VL N A G+Y + +A + G V +
Sbjct: 103 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTLTKAILHYTGKVIWTPPAIFKSS 159
Query: 484 ISMQLDNWPNDMQTCTFKFGS 546
+ + +P D QTC KFGS
Sbjct: 160 CEIDVRYFPFDQQTCFMKFGS 180
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 37.9 bits (84), Expect = 4e-04
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 492
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 94 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 150
Query: 493 QLDNWPNDMQTCTFKFGS 546
++ +P D QTC KFGS
Sbjct: 151 DVEYFPFDEQTCFMKFGS 168
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 35.5 bits (78), Expect = 0.002
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 358 LWRPDVVLL-NAAATTAGDYA-LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCT 531
+WRPDVVL NA + Y V + G V + + + + WP D Q C
Sbjct: 118 VWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCI 177
Query: 532 FKFGS 546
K GS
Sbjct: 178 VKIGS 182
Score = 33.5 bits (73), Expect = 0.009
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 153 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGV 323
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 324 G 326
G
Sbjct: 106 G 106
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 756 RGSPXXLXPPGSPRAGXXRXALGPPXARGVR 848
+G+ + PPG+P A G P ++GV+
Sbjct: 65 KGNSGPVGPPGAPGRDGMPGAPGLPGSKGVK 95
Score = 23.4 bits (48), Expect = 9.2
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 780 PPGSPRAGXXRXALGPPXARGVRVXXLTPG 869
PPG P A + G P G+R PG
Sbjct: 303 PPGEPGAASEKGQNGEPGVPGLRGNDGIPG 332
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,509
Number of Sequences: 2352
Number of extensions: 17897
Number of successful extensions: 78
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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