Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_F19
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.4  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.4  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.2  
Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKXL-----PRRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL    +      R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKXL-----PRRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL    +      R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKXL-----PRRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL    +      R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical
           protein C44B9.5 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
 Frame = +2

Query: 266 YFDLTGTETKSNSVTVQSLPNVSSIIKXYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCW 439
           +F+   ++T +    +++  N SSI+     AY  +  L+  +  S P  K     +   
Sbjct: 222 FFEKNPSKTSNRDSKIENRSNSSSIMYNDPSAYSNDSILDDTIISSTPPDKSSFLAETMP 281

Query: 440 TTADVTVEXVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIXYTNHPQT*H 616
                        A P+SS  +I G  ++       DLG +  + K    Y + P T H
Sbjct: 282 LATPSPKNLTPKRALPTSSARSIFGHVVLPNPMKRKDLGVLAAVEKPEFDYPSSPITLH 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,838,637
Number of Sequences: 27780
Number of extensions: 283743
Number of successful extensions: 784
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)