Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_F14
(911 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 47 7e-07
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 44 5e-06
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 44 9e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 41 5e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 41 5e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 37 7e-04
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 9.7
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 47.2 bits (107), Expect = 7e-07
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 302
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 303 WNAGEWGCSTWL-VYSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
WN E+G L + +LW+PDV++ N+A G Y V NNGS
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 150 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW 320
LL YD R S + V + + H I E +ST+ + ++ +W D +L WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 321 GCSTWLVYSERL-WRPDVVLLNAA 389
G + + + WRPDVVL N A
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNA 129
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-06
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 302
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 303 WNAGEWGCSTWL-VYSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
WN E+G L + +LW+PDV++ N+A G Y V NNGS
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 44.0 bits (99), Expect = 6e-06
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 270 LQMNWIDKRLXWNAGEWGCSTWL-VYSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
L++ W D + WN+ E+G L + RLW+PDV++ N+A G Y V NNGS
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 118
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 44.0 bits (99), Expect = 6e-06
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 270 LQMNWIDKRLXWNAGEWGCSTWL-VYSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
L++ W D L WN E+G L + R+W+PDV++ N+A G Y V NNGS
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 150
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 44.0 bits (99), Expect = 6e-06
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +3
Query: 138 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 296
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 297 LXWNAGEWGCSTWL-VYSERLWRPDVVLLNAA 389
W+ E+G T L V SE +W PD+VL N A
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 128
Score = 23.8 bits (49), Expect = 7.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 502 WPNDMQTCTFKFGS 543
+P D QTC KFGS
Sbjct: 167 FPFDQQTCFMKFGS 180
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 43.6 bits (98), Expect = 9e-06
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLX 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 303 WNAGEWGCSTWL-VYSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 446
W E+G L V S+ +WRPD+VL N A G Y + +A V NNG V
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYNNA---DGHYEVTLMTKATVYNNGMV 140
Score = 25.0 bits (52), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 484 SMHLDNWPNDMQTCTFKFGS 543
S+ ++ +P D+QTC K GS
Sbjct: 153 SIDVEYFPYDVQTCVLKLGS 172
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 42.7 bits (96), Expect = 1e-05
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +3
Query: 138 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 296
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 297 LXWNAGEWG-CSTWLVYSERLWRPDVVLLNAA 389
L WN ++G T V SE +W PD+VL N A
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 116
Score = 23.4 bits (48), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 493 LDNWPNDMQTCTFKFGS 543
++ +P D QTC KFGS
Sbjct: 152 VEYFPFDEQTCFMKFGS 168
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 41.1 bits (92), Expect = 5e-05
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLX 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 303 WNAGEWGCSTWL-VYSERLWRPDVVLLNAA 389
W E+G L V S+ +WRPD+VL N A
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYNNA 120
Score = 24.2 bits (50), Expect = 5.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 493 LDNWPNDMQTCTFKFGS 543
++ +P D QTC KFGS
Sbjct: 156 VEYFPFDEQTCVLKFGS 172
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 41.1 bits (92), Expect = 5e-05
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +3
Query: 111 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 269
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 18 CGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 75
Query: 270 LQMNWIDKRLXWNAGEWGCSTWL-VYSERLWRPDVVLLNAA 389
++ W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 76 VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 493 LDNWPNDMQTCTFKFGSXMPIVTEMDFR 576
++ +P D QTC KFGS ++D R
Sbjct: 152 VEYFPFDEQTCVMKFGSWTYDGFQVDLR 179
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 39.5 bits (88), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 138 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLX 302
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 303 WNAGEWGCSTWL-VYSERLWRPDVVLLN 383
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
Score = 26.6 bits (56), Expect = 1.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 487 MHLDNWPNDMQTCTFKFGS 543
M+++ +P D QTC KFGS
Sbjct: 156 MNVEYFPYDEQTCLMKFGS 174
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 37.1 bits (82), Expect = 7e-04
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 228 NIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVYSERLWRPDVVLLNAAATTAG 404
N+ E ++ L++ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 405 DYALR 419
+Y +R
Sbjct: 122 NYEVR 126
Score = 24.2 bits (50), Expect = 5.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 502 WPNDMQTCTFKFGS 543
+P D QTC KFGS
Sbjct: 158 FPFDQQTCIMKFGS 171
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 9.7
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -1
Query: 464 KRFMQGDGAVIRYTGAESVVPGGGCSRV*QYHVRPPQAFRVHQPSAA 324
K + D +R++ S V G G H PQ R H+ S A
Sbjct: 191 KSYWYSDHRYVRFSVDSSSVLGNGIQLHRHQHQLQPQQRRFHRQSPA 237
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,395
Number of Sequences: 2352
Number of extensions: 14689
Number of successful extensions: 56
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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