Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_F10
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   3.9  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   6.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   6.8  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 302 CWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEG 421
           C  + D SW++  VDC    Y  RL   +     Q+  +G
Sbjct: 762 CTCYHDQSWSSNVVDCSRAGYDDRLPDQIPMDSTQIYLDG 801


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +3

Query: 327 GLRALLTVWAEHMSEDCRRRFYK 395
           G+R   ++WAE +  +CR+++ +
Sbjct: 770 GIRYASSIWAESLKFECRKQWLR 792


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 27  LPACRTENFQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDP 146
           +PA    + QHP H  +  +P    H+H  + +  P+  P
Sbjct: 87  MPAQPPHHHQHPHHHQLPHHP---HHQHHPQQQPSPQTSP 123


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 27  LPACRTENFQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDP 146
           +PA    + QHP H  +  +P    H+H  + +  P+  P
Sbjct: 87  MPAQPPHHHQHPHHHQLPHHP---HHQHHPQQQPSPQTSP 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 896,971
Number of Sequences: 2352
Number of extensions: 18906
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)