Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_F10
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 322 1e-88
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 322 1e-88
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 322 1e-88
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 322 1e-88
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 241 3e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 130 9e-31
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 130 9e-31
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 7.4
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 322 bits (792), Expect = 1e-88
Identities = 148/240 (61%), Positives = 176/240 (73%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 590
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEDKVKWATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
NGGTIE KV WA EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 244
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 322 bits (792), Expect = 1e-88
Identities = 148/240 (61%), Positives = 176/240 (73%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 590
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEDKVKWATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
NGGTIE KV WA EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 244
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 322 bits (792), Expect = 1e-88
Identities = 148/240 (61%), Positives = 176/240 (73%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 590
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEDKVKWATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
NGGTIE KV WA EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 244
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 322 bits (792), Expect = 1e-88
Identities = 148/240 (61%), Positives = 176/240 (73%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 590
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 591 NGGTIEDKVKWATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
NGGTIE KV WA EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 244
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 235 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQM 539
WQDE G+K I DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 187 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 226
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 230
F P HG MGF PKKRS +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 231 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 410
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 411 XXXXXXXXXXXWQDELGRKSIXKDFXKMIRYCSVVRVIAHTQM 539
WQDE G+K I DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 187 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 226
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 130 bits (315), Expect = 9e-31
Identities = 64/109 (58%), Positives = 76/109 (69%)
Frame = +3
Query: 444 WQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 623
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 624 ATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
A EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 146
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 176
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPK 137
F P HG MGF PKKRS +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 130 bits (315), Expect = 9e-31
Identities = 64/109 (58%), Positives = 76/109 (69%)
Frame = +3
Query: 444 WQDELGRKSIXKDFXKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 623
WQDE G+K I DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 624 ATEHLEKPIPVDSVFAQXEMIDCIXXXXXXXXXXXXSRLAHKXXTPLKT 770
A EHLEK + VD+VFAQ EMID I SR H P KT
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRW-HTKKLPRKT 146
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 739 WHTXXLPR*KHKGLXKVACIGAWHPSRVXFTVPRAGQKGY 858
WHT LPR HKGL KVACIGAWHPSRV FTV RAGQKG+
Sbjct: 137 WHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 176
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 51 FQHPAHGSMGFYPKKRSHRHRGKVKAFPK 137
F P HG MGF PKKRS +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 276 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 404
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 257 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 424
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 559 KRRLTLWKSNLTVVPSRTK*NGPQNIWRNLSL 654
K RL L K +V S K GPQ W N+ L
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPL 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,619,022
Number of Sequences: 27780
Number of extensions: 412707
Number of successful extensions: 1112
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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