Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_F07
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    45   3e-06
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    39   2e-04
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    39   2e-04
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    38   5e-04
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    36   0.002
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    36   0.002
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    36   0.002
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    35   0.003
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    35   0.003
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    34   0.005
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    34   0.006
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    34   0.006
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   8.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.6  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = +3

Query: 345 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 512
           V S+ +WRPD+VL N A    G Y +    +A V NNG V W       +  S+ ++ +P
Sbjct: 104 VPSDHIWRPDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFP 160

Query: 513 NDMQTCTFQV 542
            D+QTC  ++
Sbjct: 161 YDVQTCVLKL 170


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 39.1 bits (87), Expect = 2e-04
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           V S+ +WRPD+VL  NA        A +A + + G V W       +   + ++ +P D 
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163

Query: 522 QTCTFQ 539
           QTC  +
Sbjct: 164 QTCVLK 169


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           V S+ +WRPD+VL  NA        A +A ++  G V W       +   + ++ +P D 
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159

Query: 522 QTCTFQ 539
           QTC  +
Sbjct: 160 QTCVMK 165


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 37.5 bits (83), Expect = 5e-04
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +3

Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           +++W+PD+VL N A    G+Y +R +    +  NG V W+      +  ++ +  +P D 
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQ 162

Query: 522 QTC 530
           QTC
Sbjct: 163 QTC 165


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +3

Query: 360 LWRPDVVLLN-AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 533
           +WRPDVVL N A  +    Y      V + G V W+   +      + +  WP D Q C 
Sbjct: 118 VWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCI 177

Query: 534 FQV 542
            ++
Sbjct: 178 VKI 180



 Score = 33.1 bits (72), Expect = 0.011
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +2

Query: 155 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGRV 325
           LL  YD   R S   +   V   + + H  I E +ST+ +   ++ +W D +L+WN    
Sbjct: 46  LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105

Query: 326 G 328
           G
Sbjct: 106 G 106


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
 Frame = +3

Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 494
           G     V SE++W PD+VL N      G+Y +    +A +   G V W       +   M
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEM 156

Query: 495 QLDNWPNDMQTC 530
            ++ +P D QTC
Sbjct: 157 NVEYFPYDEQTC 168


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +3

Query: 321 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTP 485
           E+G  T L V SE +W PD+VL N A    G+Y +    +A +   G V W       + 
Sbjct: 103 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTLTKAILHYTGKVIWTPPAIFKSS 159

Query: 486 ISMQLDNWPNDMQTC 530
             + +  +P D QTC
Sbjct: 160 CEIDVRYFPFDQQTC 174


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           +   RLW+PDV++ N+A     G Y     V NNGS  ++      +   + +  +P D 
Sbjct: 83  IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142

Query: 522 QTC 530
           Q C
Sbjct: 143 QRC 145


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = +3

Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 494
           G  T  V SE +W PD+VL N A    G+Y +    +A + + G V W       +   +
Sbjct: 94  GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 150

Query: 495 QLDNWPNDMQTC 530
            ++ +P D QTC
Sbjct: 151 DVEYFPFDEQTC 162


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           +   R+W+PDV++ N+A     G Y     V NNGS  ++      +   + +  +P D 
Sbjct: 115 IPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 174

Query: 522 QTC 530
           Q C
Sbjct: 175 QRC 177


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 33.9 bits (74), Expect = 0.006
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           ++  +LW+PDV++ N+A     G Y     V NNGS  ++      +   + +  +P D 
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159

Query: 522 QTC 530
           Q C
Sbjct: 160 QHC 162



 Score = 23.8 bits (49), Expect = 6.5
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +2

Query: 143 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 307
           ++++LLATY+    P       + V   L L+   ++ E    +     L + W D  L 
Sbjct: 27  LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86

Query: 308 WNAGRVG 328
           WN    G
Sbjct: 87  WNDSEYG 93


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 33.9 bits (74), Expect = 0.006
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
           ++  +LW+PDV++ N+A     G Y     V NNGS  ++      +   + +  +P D 
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159

Query: 522 QTC 530
           Q C
Sbjct: 160 QHC 162



 Score = 26.6 bits (56), Expect = 0.92
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +2

Query: 143 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 307
           ++++LLATY+    P       + V   L L+   ++ E    +   A L + W D  L 
Sbjct: 27  LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86

Query: 308 WNAGRVG 328
           WN    G
Sbjct: 87  WNDSEYG 93


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 308 WNAGRVGLQHLAGVLGTLVEA 370
           WN  ++G QH+ GVLG  + A
Sbjct: 378 WN--KLGRQHMLGVLGNEIAA 396


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 154 APRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQTTELERRASGA 330
           A +N    +PPR Q   +P P   T          A TG ++ E+D     +E  A+ A
Sbjct: 233 AIKNSIMSIPPRRQMTGKPGPTIAT--------GSATTGDAAEEIDLMGHTVEELAAAA 283


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 154 APRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQTTELERRASGA 330
           A +N    +PPR Q   +P P   T          A+TG ++ E+D     +E  A+ A
Sbjct: 240 AIKNSIMSIPPRRQMTGKPGPTIAT--------GGASTGDAAEEIDLMGHTVEELAAAA 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,491
Number of Sequences: 2352
Number of extensions: 14106
Number of successful extensions: 56
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)