Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_F03
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 318 4e-87
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 318 4e-87
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 318 4e-87
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 318 4e-87
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 263 1e-70
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 263 1e-70
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 115 5e-26
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 115 5e-26
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 318 bits (780), Expect = 4e-87
Identities = 138/200 (69%), Positives = 166/200 (83%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIMEIQL 602
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 603 NGGTIXDKVKWATEHLEKPI 662
NGGTI KV WA EHLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 259
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 318 bits (780), Expect = 4e-87
Identities = 138/200 (69%), Positives = 166/200 (83%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIMEIQL 602
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 603 NGGTIXDKVKWATEHLEKPI 662
NGGTI KV WA EHLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 259
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 318 bits (780), Expect = 4e-87
Identities = 138/200 (69%), Positives = 166/200 (83%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIMEIQL 602
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 603 NGGTIXDKVKWATEHLEKPI 662
NGGTI KV WA EHLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 259
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 318 bits (780), Expect = 4e-87
Identities = 138/200 (69%), Positives = 166/200 (83%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIMEIQL 602
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 603 NGGTIXDKVKWATEHLEKPI 662
NGGTI KV WA EHLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 259
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 263 bits (645), Expect = 1e-70
Identities = 114/163 (69%), Positives = 135/163 (82%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 551
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = +1
Query: 676 VFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
V A +MID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 211
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 263 bits (645), Expect = 1e-70
Identities = 114/163 (69%), Positives = 135/163 (82%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 242
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 243 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 422
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 423 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 551
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/50 (54%), Positives = 28/50 (56%)
Frame = +1
Query: 676 VFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
V A +MID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 211
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 115 bits (276), Expect = 5e-26
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 414 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIME 593
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 594 IQLNGGTIXDKVKWATEHLEKPI 662
IQ+NGGTI KV WA EHLEK +
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQV 107
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 149
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 115 bits (276), Expect = 5e-26
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 414 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQKXAHIME 593
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQK AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 594 IQLNGGTIXDKVKWATEHLEKPI 662
IQ+NGGTI KV WA EHLEK +
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQV 107
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/52 (59%), Positives = 32/52 (61%)
Frame = +1
Query: 670 DSVFAQXEMIDCXXXXXXXXXXXXTSRWHTXXLPRXXHKGLRKVACXGXWHP 825
D+VFAQ EMID TSRWHT LPR HKGLRKVAC G WHP
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHP 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 63 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 149
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 288 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 416
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 269 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 436
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,729,434
Number of Sequences: 27780
Number of extensions: 381531
Number of successful extensions: 873
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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