Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_F02
         (868 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    39   0.008
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    39   0.008

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 173 SINXHGQXXQKTWXYERXEXDXPXIGVGAXDFAXYXSRHKXLXXQXRSXXLKXH 334
           ++  HGQ  QK W  ER   D   +G+   ++  Y  R K    Q R+  LK H
Sbjct: 9   ALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMH 62


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 173 SINXHGQXXQKTWXYERXEXDXPXIGVGAXDFAXYXSRHKXLXXQXRSXXLKXH 334
           ++  HGQ  QK W  ER   D   +G+   ++  Y  R K    Q R+  LK H
Sbjct: 9   ALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMH 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,912,083
Number of Sequences: 53049
Number of extensions: 355959
Number of successful extensions: 476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)