Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E24
(845 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 171 1e-42
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 161 8e-40
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 158 1e-38
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 154 1e-37
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 153 3e-37
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 152 7e-37
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 152 7e-37
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 152 7e-37
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 152 7e-37
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 152 7e-37
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 146 4e-35
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 146 4e-35
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 139 4e-33
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 138 9e-33
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 138 9e-33
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 138 9e-33
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 138 9e-33
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 134 1e-31
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 134 1e-31
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 134 2e-31
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 104 2e-22
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 101 1e-21
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 86 5e-17
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 77 2e-14
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 66 6e-11
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 171 bits (415), Expect = 1e-42
Identities = 90/205 (43%), Positives = 128/205 (62%)
Frame = +3
Query: 66 LPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVW 245
+ PI +E+ +AI +L +K+PG D + N LK LPV+ I LA I NA + FP W
Sbjct: 434 IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQW 493
Query: 246 KEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFR 425
K A ++ IHKPGKP SYRPISLLS++ K++ERL+ RL + +T +IL D QFGFR
Sbjct: 494 KMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFR 553
Query: 426 SKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRL 605
HS V+QVHRLT+HIL + ++ A+F D+ +AFD+VWH+GLI K+ + P
Sbjct: 554 QGHSTVEQVHRLTKHILQAFDDKEY--CNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPY 610
Query: 606 VLIIRDFLFEPFVSISSXGNSFSFP 680
+++ +L E + NS+S P
Sbjct: 611 YGVLKSYL-EDRRFMVRVRNSYSIP 634
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 634 NRSFRYRVXGTRSRSRQLTAGVPQGSALSPXI 729
+R F RV + S R + AGVPQGS L P +
Sbjct: 620 DRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLL 651
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 161 bits (392), Expect = 8e-40
Identities = 102/276 (36%), Positives = 140/276 (50%), Gaps = 10/276 (3%)
Frame = +3
Query: 6 APS*STGQVERRASLPPSDALPP--ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQ 179
AP QVE P +LPP +T +EV++ I L +KAPG D + NR ++LLP Q
Sbjct: 215 APESLCRQVEEYLESPFQMSLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQ 274
Query: 180 LIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLL 359
+ L I N+ + FP WK A +I IHK GK + SYRPISLL ++GKI ERL+
Sbjct: 275 ALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLI 334
Query: 360 RKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKA 539
RL K + QFGFR +H +Q+HR+ L + K+ GA F DI +A
Sbjct: 335 LNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQA 392
Query: 540 FDKVWHNGLIYKLYNMGVPDRLVLIIRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXX 719
FD+VWH GL+YK + P +L L+++ FL E +S G S
Sbjct: 393 FDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLG 451
Query: 720 PXYYLVCISMI---YPVSGXH-----LXLFADDTAI 803
P Y V S + PV+ + +ADDTA+
Sbjct: 452 PTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAV 487
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 158 bits (383), Expect = 1e-38
Identities = 101/276 (36%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Frame = +3
Query: 6 APS*STGQVERRASLPPSDALP--PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQ 179
AP QVE P +LP +T +EV++ I L +KAPG D + NR ++LLP Q
Sbjct: 413 APESLCRQVEEYLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQ 472
Query: 180 LIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLL 359
+ LA I N+ + FP WK A +I IHK GK + SYRP SLL ++GKI ERL+
Sbjct: 473 ALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLI 532
Query: 360 RKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKA 539
RL K + QFGFR +H +Q+HR+ L + K+ GA F DI +A
Sbjct: 533 LNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQA 590
Query: 540 FDKVWHNGLIYKLYNMGVPDRLVLIIRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXX 719
FD+VWH GL+YK + P +L L+++ FL E +S G S
Sbjct: 591 FDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLG 649
Query: 720 PXYYLVCISMI---YPVSGXH-----LXLFADDTAI 803
P Y V S + PV+ + +ADDTA+
Sbjct: 650 PTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAV 685
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 154 bits (374), Expect = 1e-37
Identities = 83/186 (44%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 539
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK NE SYRPISLLS + KI+ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKE 599
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGSEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 612 IIRDFL 629
I+ +L
Sbjct: 657 ILESYL 662
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 659 ESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLL 696
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 153 bits (371), Expect = 3e-37
Identities = 81/186 (43%), Positives = 113/186 (60%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT +E+ + I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 492 PITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 551
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK +NE SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 552 AQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 611
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 612 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 668
Query: 612 IIRDFL 629
I+ +L
Sbjct: 669 ILESYL 674
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 671 ESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLL 708
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 152 bits (368), Expect = 7e-37
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 364 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 423
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 424 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 483
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 484 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 540
Query: 612 IIRDFL 629
I+ +L
Sbjct: 541 ILESYL 546
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 543 ESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 580
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 152 bits (368), Expect = 7e-37
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 612 IIRDFL 629
I+ +L
Sbjct: 657 ILESYL 662
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 659 ESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 152 bits (368), Expect = 7e-37
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 612 IIRDFL 629
I+ +L
Sbjct: 657 ILESYL 662
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 659 ESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 152 bits (368), Expect = 7e-37
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 442 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 501
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 502 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 561
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 562 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 618
Query: 612 IIRDFL 629
I+ +L
Sbjct: 619 ILESYL 624
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 621 ESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 658
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 152 bits (368), Expect = 7e-37
Identities = 81/186 (43%), Positives = 111/186 (59%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
PIT E+ D I NL+ KAPG D I N+ +K LP + L I N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A V I KPGK N+ SYRPISLLS + K++ERLL KRL+ K + QFGFR +
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKE 599
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H QQ+ R+T+ IL R++ A+F DI++AFD+VWH GL+ KL + +P L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 612 IIRDFL 629
I+ +L
Sbjct: 657 ILESYL 662
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYR-VXGTRSRSRQLTAGVPQGSALSPXI 729
E+ +NR+F + G SR+ Q+ AGVPQGS L P +
Sbjct: 659 ESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPIL 696
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 146 bits (353), Expect = 4e-35
Identities = 83/244 (34%), Positives = 127/244 (52%)
Frame = +3
Query: 75 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEA 254
+T EV + L RK+PG DGI N +LK LP I + I N + FP WK A
Sbjct: 461 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 520
Query: 255 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKH 434
++ I KPGKP + SYRPISLLS + KI E+L++ RL F+ + L Q+GFR+
Sbjct: 521 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 580
Query: 435 SCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 614
+ + +L +I + ++ + G + DI AFD VWH+GL++KL +G P L+ I
Sbjct: 581 NTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKI 638
Query: 615 IRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISMIYPVSGXHLXLFADD 794
+++FL + S++ + + + P + + I + L LFADD
Sbjct: 639 VQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADD 698
Query: 795 TAIY 806
A+Y
Sbjct: 699 AAVY 702
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 146 bits (353), Expect = 4e-35
Identities = 83/244 (34%), Positives = 127/244 (52%)
Frame = +3
Query: 75 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEA 254
+T EV + L RK+PG DGI N +LK LP I + I N + FP WK A
Sbjct: 409 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 468
Query: 255 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKH 434
++ I KPGKP + SYRPISLLS + KI E+L++ RL F+ + L Q+GFR+
Sbjct: 469 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 528
Query: 435 SCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 614
+ + +L +I + ++ + G + DI AFD VWH+GL++KL +G P L+ I
Sbjct: 529 NTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKI 586
Query: 615 IRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISMIYPVSGXHLXLFADD 794
+++FL + S++ + + + P + + I + L LFADD
Sbjct: 587 VQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADD 646
Query: 795 TAIY 806
A+Y
Sbjct: 647 AAVY 650
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 139 bits (337), Expect = 4e-33
Identities = 73/171 (42%), Positives = 99/171 (57%)
Frame = +3
Query: 66 LPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVW 245
+ P EV + I KAPG D I N LK LP Q I + + NA + FP W
Sbjct: 433 ITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQW 492
Query: 246 KEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFR 425
K + IHKPGKP E +SYRPISLL +I K++ERL+ R+ + + A I + QFGFR
Sbjct: 493 KLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFR 552
Query: 426 SKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKL 578
+ H V+Q+HR+ E IL + ++ +LF DI +AFD+VWH GL K+
Sbjct: 553 AGHCTVEQLHRVVEQILTAYDSKEY--CNSLFLDIREAFDRVWHIGLQLKI 601
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 138 bits (334), Expect = 9e-33
Identities = 75/201 (37%), Positives = 114/201 (56%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
P+T E+ I++L+ +KAPG+D ++N+ + LP + L I N + FP WK
Sbjct: 36 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 95
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K + QFGFR
Sbjct: 96 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKD 155
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 156 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 212
Query: 612 IIRDFLFEPFVSISSXGNSFS 674
++ ++L S+ G + S
Sbjct: 213 LLENYLSNRTFSVRIDGETTS 233
Score = 36.7 bits (81), Expect = 0.040
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYRVXG-TRSRSRQLTAGVPQGSALSPXI 729
E SNR+F R+ G T SR + AGVPQGS L P +
Sbjct: 215 ENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 252
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 138 bits (334), Expect = 9e-33
Identities = 75/201 (37%), Positives = 114/201 (56%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
P+T E+ I++L+ +KAPG+D ++N+ + LP + L I N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K + QFGFR
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKD 602
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 612 IIRDFLFEPFVSISSXGNSFS 674
++ ++L S+ G + S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 36.7 bits (81), Expect = 0.040
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYRVXG-TRSRSRQLTAGVPQGSALSPXI 729
E SNR+F R+ G T SR + AGVPQGS L P +
Sbjct: 662 ENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 138 bits (334), Expect = 9e-33
Identities = 75/201 (37%), Positives = 114/201 (56%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
P+T E+ I++L+ +KAPG+D ++N+ + LP + L I N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K + QFGFR
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKD 602
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 612 IIRDFLFEPFVSISSXGNSFS 674
++ ++L S+ G + S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 36.7 bits (81), Expect = 0.040
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYRVXG-TRSRSRQLTAGVPQGSALSPXI 729
E SNR+F R+ G T SR + AGVPQGS L P +
Sbjct: 662 ENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 138 bits (334), Expect = 9e-33
Identities = 75/201 (37%), Positives = 114/201 (56%)
Frame = +3
Query: 72 PITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKE 251
P+T E+ I++L+ +KAPG+D ++N+ + LP + L I N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 252 ADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSK 431
A + I KPGK +SYRPISLLS + K+ ER+L KRL++ + K + QFGFR
Sbjct: 543 ASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKD 602
Query: 432 HSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 611
H Q+ R+T+ IL + + A F DI +AFD+VWH+GL+YKL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 612 IIRDFLFEPFVSISSXGNSFS 674
++ ++L S+ G + S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 36.7 bits (81), Expect = 0.040
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 619 ETSCSNRSFRYRVXG-TRSRSRQLTAGVPQGSALSPXI 729
E SNR+F R+ G T SR + AGVPQGS L P +
Sbjct: 662 ENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVL 699
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 134 bits (324), Expect = 1e-31
Identities = 84/258 (32%), Positives = 129/258 (50%)
Frame = +3
Query: 30 VERRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILN 209
V R P P T ++D NL P+K+PG D I + LP + + + N
Sbjct: 422 VNRHQQHTPIVFRPKEITKIIKD---NLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFN 478
Query: 210 AAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTA 389
A FP WK +I I KPGK SSYRPISLLS I K++E+ L RL T
Sbjct: 479 AITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTY 538
Query: 390 NKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLI 569
+ I+ QFGFR H ++QV+R+T I R+ A+F D+++AFDKVW +GL+
Sbjct: 539 HNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCT--AVFLDVSQAFDKVWLDGLM 596
Query: 570 YKLYNMGVPDRLVLIIRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISM 749
+K+ + +P+ +++ +L++ ++ + + + + P YL+ +
Sbjct: 597 FKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTAD 655
Query: 750 IYPVSGXHLXLFADDTAI 803
I S + FADDTAI
Sbjct: 656 IPTNSRLTVSTFADDTAI 673
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 134 bits (324), Expect = 1e-31
Identities = 77/232 (33%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Frame = +3
Query: 111 LQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPT 290
L PRK+PG D I R L LP I + + NA FP WK++ ++ I KPGK
Sbjct: 444 LNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDK 503
Query: 291 NETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEH 470
+ SSYRPISLL+ + K++E++L R+ + N L QFGFR KH ++QV+R+T
Sbjct: 504 TQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSE 563
Query: 471 ILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLFEPFVSI 650
I R+ A+F D+A+AFD+VW +GL++K+ + +P +++ +L+ +I
Sbjct: 564 IRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAI 620
Query: 651 SSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISMIYPVS-GXHLXLFADDTAI 803
++ + + P Y + + +P+ FADDTAI
Sbjct: 621 RCDTSTSRDCAIEAGVPQGSVLGPILYTL-YTADFPIDYNLTTSTFADDTAI 671
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 134 bits (323), Expect = 2e-31
Identities = 77/232 (33%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Frame = +3
Query: 111 LQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPT 290
L PRK+PG D I R L LP I + + NA FP WK++ ++ I KPGK
Sbjct: 444 LNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDK 503
Query: 291 NETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEH 470
+ SSYRPISLL+ + K++E++L R+ + N L QFGFR KH ++QV+R+T
Sbjct: 504 TQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSE 563
Query: 471 ILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLFEPFVSI 650
I R+ A+F D+A+AFD+VW +GL++K+ + +P +++ +L+ +I
Sbjct: 564 IRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAI 620
Query: 651 SSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISMIYPVS-GXHLXLFADDTAI 803
++ + + P Y + + +P+ FADDTAI
Sbjct: 621 RCDTSTSRDCAIEAGVPQGSVLGPILYTL-YTADFPIDYNLTTSTFADDTAI 671
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 104 bits (249), Expect = 2e-22
Identities = 63/212 (29%), Positives = 109/212 (51%)
Frame = +3
Query: 168 LPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIY 347
LP+ + + + NA FP WK++ +I I KP K + S YRPISLL+ + K++
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLF 63
Query: 348 ERLLRKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFD 527
E+ L R+ + + L QF F +KH ++QV+R+T I R+ ALF D
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLD 121
Query: 528 IAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLFEPFVSISSXGNSFSFPSTDXXXXXX 707
+A+AFD+VW +GL++K+ + +P + +++ +L + ++ ++ S + +
Sbjct: 122 VAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQG 180
Query: 708 XXXXPXYYLVCISMIYPVSGXHLXLFADDTAI 803
P Y + + I + FADDTAI
Sbjct: 181 SVLGPILYTLYTADIPTNYQLTIFTFADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 101 bits (242), Expect = 1e-21
Identities = 55/169 (32%), Positives = 91/169 (53%)
Frame = +3
Query: 123 KAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPTNETS 302
K+PG+D + LK L L L I N +T +P W+ A +I I KP KP ++ +
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 303 SYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKHSCVQQVHRLTEHILIG 482
SYRPISLLS +GK E+++ +RL F+ + ++ Q F+S HS + + R+
Sbjct: 512 SYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNA 571
Query: 483 LNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFL 629
L+ + + L D +AFD+V + ++ +L G+ RL +I+ F+
Sbjct: 572 LSTKNHV--SILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFM 618
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 631 SNRSFRYRVXGTRSRSRQLTAGVPQGSALS 720
+NRSFR R+ S S L G+PQGS LS
Sbjct: 619 TNRSFRVRINNVTSNSHILHNGIPQGSPLS 648
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 86.2 bits (204), Expect = 5e-17
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Frame = +3
Query: 51 PPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCI 230
PP+ P IT+ EV +A ++P KAPG DGI +K + + +
Sbjct: 394 PPASDFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGV 453
Query: 231 FPAVWKEADVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDE 410
FP WK+ ++ + K P N SYRP+ LL +GK++ER+L R+ + L +
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQ 513
Query: 411 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQIP-----TGALFFDIAKAFDKVWHNGLIYK 575
Q+GFR S + + +T+ L+ + + + D+ AF+ ++
Sbjct: 514 QYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGA 573
Query: 576 LYNMGVPDRLVLIIRDFLFEPFVSISSXGNSFSFPSTDXXXXXXXXXXPXYYLVCISMIY 755
+ N+GVPD + +I ++ + + + S P + + I
Sbjct: 574 MRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH-QVSAGVPQGSVLGPILWNIMYDGIL 632
Query: 756 PVS---GXHLXLFADDTAI 803
+S G L FADD AI
Sbjct: 633 SISKPRGVELHCFADDVAI 651
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 77.4 bits (182), Expect = 2e-14
Identities = 53/185 (28%), Positives = 93/185 (50%)
Frame = +3
Query: 75 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEA 254
IT E+ A+ L+ APG + I + +K + + N I P +K +
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTS 490
Query: 255 DVIGIHKPGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGFRSKH 434
+I I KP +TSSYRPISL I KI ++++ KRLW VT N ++ D+QFGF+ K
Sbjct: 491 LIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFK-KG 549
Query: 435 SCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 614
++++ + ++ T + D ++AFD+V + +I +L +++
Sbjct: 550 KSTSDCLLYVDYLI----TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKY 605
Query: 615 IRDFL 629
I++F+
Sbjct: 606 IKNFM 610
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 66.1 bits (154), Expect = 6e-11
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Frame = +3
Query: 33 ERRASLPPSDALPP-ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILN 209
E A ++ +PP + EV + L+ R++PG DGI+ K + + LA++ +
Sbjct: 419 ESEAPTAIAEEVPPALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFS 478
Query: 210 AAMTHCIFPAVWKEADVIGIHK-PGKPTNETSSYRPISLLSTIGKIYERLLRKRLWNFVT 386
+ FPA WK V+ + K P K E SSYR I LL GK+ E ++ R+ +
Sbjct: 479 RCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLP 538
Query: 387 ANKILIDEQFGFRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKVWHNGL 566
QFGFR + CV+ R H+ + F D AFD V +
Sbjct: 539 EG---CRWQFGFR-QGRCVEDAWR---HVKSSVGASAAQYVLGTFVDFKGAFDNVEWSAA 591
Query: 567 IYKLYNMG 590
+ +L ++G
Sbjct: 592 LSRLADLG 599
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,042,100
Number of Sequences: 53049
Number of extensions: 743556
Number of successful extensions: 2121
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2083
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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