Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E17
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 32 0.66
10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808... 31 0.88
04_03_0856 + 20336390-20336906,20337276-20337397 31 1.2
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 31 1.2
07_01_0663 + 4975950-4977688,4978183-4978528 31 1.5
04_03_1017 + 21747044-21748051 31 1.5
03_01_0238 + 1854070-1854344,1854621-1854712,1854852-1855045,185... 31 1.5
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 30 2.0
08_01_1010 - 10215625-10216335,10216372-10216473 30 2.0
07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239 30 2.0
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 24 3.4
06_03_0939 + 26131405-26131596,26132753-26133166 29 3.5
05_05_0261 + 23663639-23664805 29 4.7
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 4.7
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 29 4.7
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 29 4.7
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 29 4.7
12_02_0971 + 24949137-24950534 29 6.2
10_08_0445 + 17989438-17990895 29 6.2
10_07_0100 + 12861588-12862601 29 6.2
07_01_0654 - 4900509-4900518,4900626-4900709,4900844-4901377,490... 29 6.2
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 29 6.2
08_01_1026 - 10366534-10368021,10368505-10368525 28 8.2
07_01_1153 - 10842259-10842390,10843348-10845315 28 8.2
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 8.2
01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,747... 28 8.2
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 28 8.2
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2
Query: 284 GSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRSN 463
G+ A+++ P + SS G+A R P S SR GA+ PP F C + G N
Sbjct: 46 GARAASMVPEQ----SSSGLAARVPEHRS-SRYGAASPPPSSFTDGSCFFNGSAGGFFGN 100
Query: 464 I*ASPS 481
SPS
Sbjct: 101 AGQSPS 106
>10_08_0814 -
20779400-20779487,20779780-20780030,20780528-20780812,
20781563-20782008,20782095-20782485
Length = 486
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 257 QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTS 436
+LP + S + + +ST R A+R S L PR AS S AS +PPPP A S
Sbjct: 9 KLPFFASNASTSSSTKRTRSARRLPS----LTRPR-ASSSPSPASPSPPPPSASHPAPPS 63
Query: 437 P 439
P
Sbjct: 64 P 64
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 RSSPMTPPST-TRVGRRRCFIDDFRPQLPPWDSGSGSG 292
RSSP S TRVGRRR F F P W +G +G
Sbjct: 10 RSSPRGDASAPTRVGRRRAFPLPFASPPPEWPAGKLAG 47
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 188 SPMTPPSTTRVGRRRCFIDDFRP-QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 358
+P+ PPS CF+ P + W + + + PR+ S+ + L TP
Sbjct: 8 TPLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNLPLHTP 65
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 266 PWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL----GASITPPPPFAQSRCTT 433
PW + + + A+ TP + + + + TP S+S G TPPPP + TT
Sbjct: 349 PWSAAAAAAATQFTPSRRPKKDHPEIVMGTPTPLSMSAYTLSEGDYRTPPPPRHAAAVTT 408
>04_03_1017 + 21747044-21748051
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Frame = +2
Query: 167 RRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKA--------- 319
RR S TP S R RR D+ P PP + S + + PR+A
Sbjct: 169 RRAAASSPDYTPESPPR---RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Query: 320 --QRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG* 493
+R +S +P + S +TPP A T S PR ++ +PST
Sbjct: 226 PPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYTPSTPPS 285
Query: 494 HSAPTSRRYAIVPP 535
P++ VPP
Sbjct: 286 SPLPSAAESFTVPP 299
>03_01_0238 +
1854070-1854344,1854621-1854712,1854852-1855045,
1855529-1855568,1855734-1855815,1856972-1857049,
1857144-1857269,1857544-1857665,1858018-1858057,
1858250-1858324,1858414-1858585
Length = 431
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 202 AIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL-SIPLP 378
AI CR + RRL AA + +WRID N K A R R T + S+P P
Sbjct: 32 AIRCCCRAQQEPRRRLSKAAAAAPERTEEWRIDGN--KPAAAARGRRRASLTAMPSLPFP 89
Query: 379 TRR 387
+ R
Sbjct: 90 SPR 92
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/80 (32%), Positives = 31/80 (38%)
Frame = +2
Query: 158 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSK 337
P RRP+ P R GRRRC D + PP + GA PR K
Sbjct: 294 PATRRPVLGGRGRPYPRRCRTGRRRCRTDP-SSESPP----AKDGAGIYVPRDEAFTERK 348
Query: 338 GVALRTPR*ASLSRLGASIT 397
A T + +LS L A T
Sbjct: 349 AGAFATKK--ALSALSAFTT 366
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +2
Query: 185 SSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR* 364
+SP PST RR D+ P PP + S + TP +R +S TP+
Sbjct: 99 ASPDYTPSTPTPPRRAAS-PDYTPSTPPPRAASPDYTPS-TPTPPRRAASPNYTPSTPQR 156
Query: 365 ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 460
+ S TP PP + +P P R+
Sbjct: 157 HAASPDYTPSTPTPPRRAASLDYTPSTPPPRA 188
>07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239
Length = 569
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 287 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRSNI 466
+G++ TPR CS GV P+ L S+ PP A S + +P G R+ +
Sbjct: 18 AGSAARTPR-GWCCSFAGV----PQSPDLRPFPPSLAPPATAASS--SPAPGGGAGRNKL 70
Query: 467 *A-SPSTVG*HSAPTSRRYA 523
SPS HS+PTS R A
Sbjct: 71 PPKSPSISSFHSSPTSSRLA 90
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 20 YETTCRTVRSDIESRERVPGPVTSQPESARLRPLPXYYSVCISTIYPGLRRPIWRSSPMT 199
+ ++ ++ +IES P + AR P P S+ +S+ P L P+ S P
Sbjct: 10 HSSSAQSDMDEIESLIHAAPPSAAAVLPAR-PPSPPRASIPVSSSPPLLPPPVAGSKPQL 68
Query: 200 PP 205
PP
Sbjct: 69 PP 70
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 251 RPQLPPWDSGSGSGASTLTP 310
+PQLPP+ S S +S+ P
Sbjct: 65 KPQLPPFSSSSSVASSSSPP 84
>06_03_0939 + 26131405-26131596,26132753-26133166
Length = 201
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 315 FRGVNVDAPLPEPLSHGGSCGLKS--SMKQRLLPTRVVDGGVIGEERQ 178
F G++ APLP P + G CG + S+ + P+ ++ G + ++R+
Sbjct: 134 FSGLHYKAPLPRPSAGGHRCGAVATPSVTDEVAPSALLLGHIAPQQRK 181
>05_05_0261 + 23663639-23664805
Length = 388
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 455 FGAHGMGWSYIVIGRTAGAGLLT 387
FGA+ GW+++ G T G LL+
Sbjct: 84 FGAYDGGWAFVAFGHTVGYALLS 106
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 380 LGASITPPPPFAQSRCTTSPYRGP 451
LGA++ PPPP A ++ +P GP
Sbjct: 82 LGAALPPPPPAAAAQPAVAPLPGP 105
>03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 316 STAVLFKRGRPPNTTLSIPLPTRR 387
S FKRG PP + +PLP R+
Sbjct: 118 SNGYAFKRGNPPEGIVEVPLPPRQ 141
>02_05_0190 -
26592452-26592693,26592911-26593004,26593425-26593656,
26594660-26595066
Length = 324
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = +2
Query: 278 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRR 457
G G GAST SS G PR S RL + +PPPP A + R RR
Sbjct: 27 GGGGGASTSATSPVAASSSSG---GRPRTRSGGRLLRATSPPPPSAIAAAACWESRTMRR 83
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +2
Query: 158 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPP--WDSGSGSG 292
P LR P SP P+ T V DD RP+LP W G G G
Sbjct: 44 PELREPT-SPSPSLAPAPTPVSGAGGGDDDMRPRLPTERWRRGGGRG 89
>12_02_0971 + 24949137-24950534
Length = 465
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 450 GPRYGLVVHRDWANGGGGVIDAPSRERDAQRGVRRA 343
G G V H W GG GV P R A RG R A
Sbjct: 313 GSSDGAVTHWQWRRGGAGVA-GPPRNGGALRGHRMA 347
>10_08_0445 + 17989438-17990895
Length = 485
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 251 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCT 430
RP P + PR+ +R ++ VA R R S ++TPPP R
Sbjct: 368 RPVTVPKSETWATTTDEQQPRRRERAAAAAVARREIR---KSATATNMTPPPSPPHVRAP 424
Query: 431 TSPYRGPRRS 460
+P R P R+
Sbjct: 425 PAPARRPWRT 434
>10_07_0100 + 12861588-12862601
Length = 337
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +2
Query: 92 QPESARLRPLPXYYSVCISTIYPG-----LRRPIWRSSPMTPPSTTRVGRRR 232
+P + R P Y ST P RRP +P TPP+TT R R
Sbjct: 180 RPSAQRPACSPDYPEPACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARAR 231
>07_01_0654 -
4900509-4900518,4900626-4900709,4900844-4901377,
4901462-4901619,4901703-4901832,4901918-4901999,
4902097-4902230,4902314-4902410,4902512-4902788,
4902881-4903024
Length = 549
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 389 SITPPPPFAQSRCT-TSPYRG 448
S TPPPPFA T TSP +G
Sbjct: 491 SATPPPPFAHGAITKTSPQKG 511
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 272 DSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASL--SRLGASITPPPPFAQSRCTTSPYR 445
+ G+ A P + Q + G RTP SL S S TPP P + TT+P
Sbjct: 128 EDGAAGTAQGRRPGRPQLHLATGRLFRTPSQGSLAMSSPSPSPTPPSPLTPAPATTAPAP 187
Query: 446 GP 451
P
Sbjct: 188 TP 189
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +2
Query: 185 SSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGV 343
S+P PP +D +PP G G G +P K +S GV
Sbjct: 85 SAPPPPPPAEPEPEPEQDEEDAASMIPPASDGGGGGGGGFSPTKLSMLTSAGV 137
>07_01_1153 - 10842259-10842390,10843348-10845315
Length = 699
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 51 ISSRGNAF-PAPSRHSRSPQGSALSPXTIQFVY 146
+ +G+AF P P R RSP GS LS + FV+
Sbjct: 60 VQQKGHAFYPVPLRFVRSPNGSVLS-FSASFVF 91
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 380 LGASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVPP 535
L AS PPPP R + SP + P ++ P T + PT+ A PP
Sbjct: 73 LAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPP 124
>01_01_0953 -
7472173-7472178,7472216-7472311,7472370-7472462,
7472855-7473019,7473689-7474821,7474902-7475426,
7477077-7477249,7478737-7478831,7478893-7481688
Length = 1693
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 116 PLPXYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLP 265
P+ S S I P L+ P W S PM + R F+ +F+ Q+P
Sbjct: 457 PVVDMESFFTSVIVPELQAPDWESEPMLKATVLR------FLKEFKDQIP 500
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 284 GSGASTLTPRKAQRCSSKGVALRT-PR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 460
G GA L P +A+R L T P S + PPPP SR T R P++
Sbjct: 29 GLGAGDLPPMEARRFRWWADELATAPPLPPWSLSPSPSPPPPPTKPSRRTLGKARAPKKR 88
Query: 461 NI 466
+I
Sbjct: 89 SI 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,947,965
Number of Sequences: 37544
Number of extensions: 659697
Number of successful extensions: 2520
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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