Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E16
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open readi... 38 0.044
AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens ... 38 0.044
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 35 0.31
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 35 0.31
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 35 0.31
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 35 0.31
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.8
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.8
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.8
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -... 30 8.8
BX537361-1|CAD97607.1| 1191|Homo sapiens hypothetical protein pr... 30 8.8
BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine phosph... 30 8.8
AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine phosp... 30 8.8
AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine phosph... 30 8.8
AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine phosph... 30 8.8
AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein. 30 8.8
AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1 pr... 30 8.8
>BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open reading
frame 25 protein.
Length = 872
Score = 37.9 bits (84), Expect = 0.044
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 542 PCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPY*KEFAPG---LKPXVVIRGSISVSH 712
P D+ Y+ + +SP + Q P P P P +P PG P + S V+H
Sbjct: 280 PQDVAYLQDMPRSPGDVPQSPSDVSPSPDAPQSPGGMPHLPGDVLHSPGDMPHSSGDVTH 339
Query: 713 PPRHWAWLKGFRPPYFQLND 772
PR L G RP + Q ND
Sbjct: 340 SPRDIPHLPGDRPDFTQ-ND 358
>AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ44216 fis, clone THYMU3003763. ).
Length = 326
Score = 37.9 bits (84), Expect = 0.044
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 542 PCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPY*KEFAPG---LKPXVVIRGSISVSH 712
P D+ Y+ + +SP + Q P P P P +P PG P + S V+H
Sbjct: 191 PQDVAYLQDMPRSPGDVPQSPSDVSPSPDAPQSPGGMPHLPGDVLHSPGDMPHSSGGVTH 250
Query: 713 PPRHWAWLKGFRPPYFQLND 772
PR L G RP + Q ND
Sbjct: 251 SPRDIPHLPGDRPDFTQ-ND 269
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 35.1 bits (77), Expect = 0.31
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKGVRAGVKAXGC- 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV+ G
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQRLHQRISPP 717
Q+ Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 35.1 bits (77), Expect = 0.31
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKGVRAGVKAXGC- 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV+ G
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQRLHQRISPP 717
Q+ Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 35.1 bits (77), Expect = 0.31
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKGVRAGVKAXGC- 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV+ G
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQRLHQRISPP 717
Q+ Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 35.1 bits (77), Expect = 0.31
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKGVRAGVKAXGC- 684
R+ YA+S+P P+ + P Q P PT P + NP + ++AGV+ G
Sbjct: 2088 RAAKYANSNPQPIPGQPGMPQGQ-PGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 685 HQRLHQRISPP 717
Q+ Q++ PP
Sbjct: 2147 QQQPQQQLQPP 2157
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -16 to
1881) protein.
Length = 1897
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1505 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1547
>BX537361-1|CAD97607.1| 1191|Homo sapiens hypothetical protein
protein.
Length = 1191
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 799 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 841
>BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1506 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1548
>AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1907
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1515 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1557
>AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1506 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1548
>AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine
phosphatase, receptor type, F isoform 2 precursor variant
protein.
Length = 1552
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1160 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1202
>AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein.
Length = 1918
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1526 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1568
>AB177856-1|BAD66834.1| 1484|Homo sapiens LAR splice variant 1
protein.
Length = 1484
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSI-SINPLNA--VLKGVRAGVKAXGC 684
PDH +PE+ TP L + + NPL+A ++ AGV GC
Sbjct: 1092 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGC 1134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,319,169
Number of Sequences: 237096
Number of extensions: 2577214
Number of successful extensions: 9924
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9917
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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