Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E14
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 206 2e-53
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 206 2e-53
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 206 2e-53
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 206 2e-53
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 159 2e-39
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 108 6e-24
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 108 6e-24
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 30 2.5
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 28 7.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 183 IQVNGGTIEQKVDWAREHLEK 203
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 246 KGLRKVACIGAWHPSRV 262
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 183 IQVNGGTIEQKVDWAREHLEK 203
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 246 KGLRKVACIGAWHPSRV 262
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 183 IQVNGGTIEQKVDWAREHLEK 203
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 246 KGLRKVACIGAWHPSRV 262
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 111/141 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 183 IQVNGGTIEQKVDWAREHLEK 203
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 246 KGLRKVACIGAWHPSRV 262
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 159 bits (386), Expect = 2e-39
Identities = 70/106 (66%), Positives = 83/106 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQM 536
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 198 KGLRKVACIGAWHPSRV 214
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 159 bits (386), Expect = 2e-39
Identities = 70/106 (66%), Positives = 83/106 (78%)
Frame = +3
Query: 219 PVSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNW 398
P SK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQM 536
K KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 107 bits (256), Expect = 1e-23
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGF 226
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 227 K-NQQE 241
K N++E
Sbjct: 66 KVNKKE 71
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 198 KGLRKVACIGAWHPSRV 214
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 108 bits (259), Expect = 6e-24
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +3
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
Y+ KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 85 IQVNGGTIEQKVDWAREHLEK 105
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 133
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 148 KGLRKVACIGAWHPSRV 164
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 108 bits (259), Expect = 6e-24
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +3
Query: 399 YKCXXKAFTKASXKWQDELGRKSIQKDFXXMIRYCSVVRVIAHTQMXLLKQRQKXAHIME 578
Y+ KAFTK + KWQDE G+K I+ DF + +YCS +RVIAHTQM +L++RQK AH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 579 IQLNXGTIEDKVKWAXKHLXK 641
IQ+N GTIE KV WA +HL K
Sbjct: 85 IQVNGGTIEQKVDWAREHLEK 105
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 47 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 133
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 767 KGXRKXACXGPWXPSRV 817
KG RK AC G W PSRV
Sbjct: 148 KGLRKVACIGAWHPSRV 164
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -3
Query: 157 MNRFARVVFRERLDLTTMTTGPLFGIESHRPMSGVLKIFCATWLEDSRKL 8
M R R R T T LF + P +L+I C T L+DSR L
Sbjct: 278 MERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSL 327
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -3
Query: 157 MNRFARVVFRERLDLTTMTTGPLFGIESHRPMSGVLKIFCATWLEDSRKL 8
M R R R T T LF + P +L+I C T L+DSR L
Sbjct: 278 MERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSL 327
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 273 TPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWY 401
T P + GY+ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 137 DPSKPVHLTAFIGYKAGMT-HVVREPDRPGFKNQQERDRGGCHHHRDSSDGLCRC 298
DPSKP++L GY +G + +++ F + D GC + G+ RC
Sbjct: 182 DPSKPLYLGYKNGYNSGGSGYILSNAAVKLFVEKSYHDEYGCPYDWAEDHGIGRC 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,868,904
Number of Sequences: 27780
Number of extensions: 318751
Number of successful extensions: 680
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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