Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E09
(831 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific ... 36 0.14
AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein. 36 0.14
AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific ... 36 0.14
BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein. 34 0.55
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 34 0.73
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 33 0.96
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 33 0.96
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 33 0.96
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 33 0.96
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein. 33 0.96
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 33 0.96
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 33 0.96
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 33 0.96
AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfam... 33 0.96
AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens ... 33 0.96
Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein. 33 1.7
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 33 1.7
BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfam... 33 1.7
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 33 1.7
AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfam... 33 1.7
AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens ... 33 1.7
AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfam... 33 1.7
AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor... 33 1.7
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 33 1.7
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 32 2.2
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 32 2.2
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 32 2.2
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 32 2.2
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 32 2.2
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 32 2.2
U15008-1|AAC13776.1| 118|Homo sapiens Sm D2 protein. 32 2.9
BC022570-1|AAH22570.1| 224|Homo sapiens MGC27121 gene protein. 32 2.9
BC001930-1|AAH01930.1| 118|Homo sapiens small nuclear ribonucle... 32 2.9
BC000486-1|AAH00486.1| 118|Homo sapiens small nuclear ribonucle... 32 2.9
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 32 2.9
AC007191-2|AAD22673.1| 118|Homo sapiens SMD2_HUMAN protein. 32 2.9
BC014233-1|AAH14233.2| 235|Homo sapiens MGC20647 protein protein. 31 3.9
BC008289-1|AAH08289.1| 240|Homo sapiens MGC20647 protein protein. 31 3.9
AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein. 31 3.9
AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription ... 31 3.9
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel... 31 3.9
Y00503-1|CAA68556.1| 400|Homo sapiens protein ( Human mRNA for ... 31 5.1
J03607-1|AAA36044.1| 400|Homo sapiens protein ( Human 40-kDa ke... 31 5.1
BC084574-1|AAH84574.2| 400|Homo sapiens keratin 19 protein. 31 5.1
BC067744-1|AAH67744.2| 400|Homo sapiens keratin 19 protein. 31 5.1
BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. 31 5.1
BC010409-1|AAH10409.3| 400|Homo sapiens keratin 19 protein. 31 5.1
BC007628-1|AAH07628.1| 400|Homo sapiens keratin 19 protein. 31 5.1
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 5.1
BC002539-1|AAH02539.3| 400|Homo sapiens keratin 19 protein. 31 5.1
AJ297363-1|CAB95948.1| 101|Homo sapiens hypothetical protein pr... 31 5.1
AF202321-1|AAF27048.1| 400|Homo sapiens keratin 19 protein. 31 5.1
AB041267-1|BAA94607.1| 208|Homo sapiens keratin 19 protein. 31 5.1
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 31 6.8
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 31 6.8
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 31 6.8
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 31 6.8
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 31 6.8
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 31 6.8
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 31 6.8
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 31 6.8
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 31 6.8
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 31 6.8
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 31 6.8
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 31 6.8
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 31 6.8
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 31 6.8
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 31 6.8
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 31 6.8
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 31 6.8
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 31 6.8
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 31 6.8
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 31 6.8
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 31 6.8
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 31 6.8
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 31 6.8
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 31 6.8
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 31 6.8
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 31 6.8
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 31 6.8
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 31 6.8
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 30 8.9
K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich pro... 30 8.9
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 30 8.9
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 30 8.9
BC127099-1|AAI27100.1| 649|Homo sapiens KIAA1683 protein protein. 30 8.9
BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein. 30 8.9
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 30 8.9
AK057466-1|BAB71500.1| 554|Homo sapiens protein ( Homo sapiens ... 30 8.9
>AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific
nuclear receptor protein.
Length = 410
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 669 GREPTAQCHHCADRDQGRHSGTYXWXRCSGF 761
G P+ QC C D G+H G Y CSGF
Sbjct: 40 GVSPSLQCRVCGDSSSGKHYGIYACNGCSGF 70
>AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein.
Length = 367
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 669 GREPTAQCHHCADRDQGRHSGTYXWXRCSGF 761
G P+ QC C D G+H G Y CSGF
Sbjct: 40 GVSPSLQCRVCGDSSSGKHYGIYACNGCSGF 70
>AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific
nuclear receptor protein.
Length = 410
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 669 GREPTAQCHHCADRDQGRHSGTYXWXRCSGF 761
G P+ QC C D G+H G Y CSGF
Sbjct: 40 GVSPSLQCRVCGDSSSGKHYGIYACNGCSGF 70
>BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein.
Length = 1516
Score = 34.3 bits (75), Expect = 0.55
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = -1
Query: 321 GILGSP*PRSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVSLSS 175
G L SP + A AAP + S E PS+APPPSN S SS
Sbjct: 1411 GPLPSPASATATAAPAAPEDAATSAAAAPGEGPAAPSSAPPPSNSSSSS 1459
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 33.9 bits (74), Expect = 0.73
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRS 393
SRRC S+ S S S ++ S SR R+ SP + RRRRS
Sbjct: 1356 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRS 1398
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 237 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 296
Query: 464 SN 459
+
Sbjct: 297 ED 298
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein.
Length = 181
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 54 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 113
Query: 464 SN 459
+
Sbjct: 114 ED 115
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 33.5 bits (73), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 464 SN 459
+
Sbjct: 257 ED 258
>AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.96
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 669 GREPTAQCHHCADRDQGRHSGTYXWXRCSGF 761
GR C C DR G+H G Y CSGF
Sbjct: 46 GRILDIPCKVCGDRSSGKHYGVYACDGCSGF 76
>AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ16774 fis, clone BRCAN2019772, highly similar
to Orphan nuclear receptor NR2E1. ).
Length = 422
Score = 33.5 bits (73), Expect = 0.96
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 669 GREPTAQCHHCADRDQGRHSGTYXWXRCSGF 761
GR C C DR G+H G Y CSGF
Sbjct: 46 GRILDIPCKVCGDRSSGKHYGVYACDGCSGF 76
>Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein.
Length = 385
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y CSGF
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGF 39
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVAS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 796
>BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y CSGF
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGF 39
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVAS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 796
>AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y CSGF
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGF 39
>AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ41974 fis, clone SKNMC2005772. ).
Length = 132
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 400 ITGGVASFALGGKGAPAKE*FERG---GSNLGGPCWR-RGLAAW 519
+TG S A G+ P++ F+RG S L G CW+ R A+W
Sbjct: 75 VTGPACSIAWAGRSPPSRWIFQRGLTATSTLPGSCWKGRSSASW 118
>AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfamily
2 group E member 1 protein.
Length = 385
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y CSGF
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGF 39
>AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor
protein.
Length = 385
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y CSGF
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGF 39
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 ARTSRRCDVRS-ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVAS 420
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 256 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 311
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 481 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 522
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 443 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 484
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 265 SRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRR 390
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1478 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1519
>U15008-1|AAC13776.1| 118|Homo sapiens Sm D2 protein.
Length = 118
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC022570-1|AAH22570.1| 224|Homo sapiens MGC27121 gene protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 155 ENTKKMVELRETLEGGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGDPR--IPHC 328
E + + E L+G V+ + SR DP+ + A + A RG GDP +PHC
Sbjct: 163 EEAPDLGQREEDLQGLPLVEMPRKNSRDGAELDPEANQDAPDAGALQRGGGDPPAILPHC 222
>BC001930-1|AAH01930.1| 118|Homo sapiens small nuclear
ribonucleoprotein D2 polypeptide 16.5kDa protein.
Length = 118
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC000486-1|AAH00486.1| 118|Homo sapiens small nuclear
ribonucleoprotein D2 polypeptide 16.5kDa protein.
Length = 118
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 289 ARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLPITGGVAS 420
+RSRS RS + S SR ++ SPGR + R + P + G+ S
Sbjct: 785 SRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGS 828
>AC007191-2|AAD22673.1| 118|Homo sapiens SMD2_HUMAN protein.
Length = 118
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM 172
EL+K + +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 15 ELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73
>BC014233-1|AAH14233.2| 235|Homo sapiens MGC20647 protein protein.
Length = 235
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 RGWCGRW-HYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPG 372
RG CG W H L G P P +R V R G +PS RRA GR G
Sbjct: 90 RGACGAWDHVPALAPGRHPAPPVAARAPQVFVCLRRVGVRLALPSAPSCRRAPQRGREAG 149
Query: 373 TWR 381
R
Sbjct: 150 AGR 152
>BC008289-1|AAH08289.1| 240|Homo sapiens MGC20647 protein protein.
Length = 240
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 196 RGWCGRW-HYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPG 372
RG CG W H L G P P +R V R G +PS RRA GR G
Sbjct: 95 RGACGAWDHVPALAPGRHPAPPVAARAPQVFVCLRRVGVRLALPSAPSCRRAPQRGREAG 154
Query: 373 TWR 381
R
Sbjct: 155 AGR 157
>AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 449 AGAPFPPRAKLATPPVIGSERLRLQVPGWRPG 354
A A FPP A A+PP+ RL +P RPG
Sbjct: 246 AAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277
>AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription
factor protein.
Length = 319
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 449 AGAPFPPRAKLATPPVIGSERLRLQVPGWRPG 354
A A FPP A A+PP+ RL +P RPG
Sbjct: 246 AAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277
>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1520
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -2
Query: 398 GSERLRLQVPGWRPGEQARRLEGDSAVSSDRPDRDRALRTSQRRDVLAGQ 249
G+ R L+ PG P R L+GDSA R+ A RT RR AG+
Sbjct: 1464 GTPRCALRTPGEEPPPPTRALKGDSA-RRGCSAREYARRTRGRRSPAAGR 1512
>Y00503-1|CAA68556.1| 400|Homo sapiens protein ( Human mRNA for
keratin 19. ).
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>J03607-1|AAA36044.1| 400|Homo sapiens protein ( Human 40-kDa
keratin intermediate filament precursor gene. ).
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>BC084574-1|AAH84574.2| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>BC067744-1|AAH67744.2| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein.
Length = 369
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 491 GPPR-LEPPRSNYSFAGAPFPPRAKLATPPVIGSERLRLQVPGWRPGEQAR 342
GP R L PP + F G P P A+L TPP + +R VP P +Q R
Sbjct: 165 GPVRFLGPPAAVQLFRG-PTPSPAELPTPPEMVCKRKGAGVPACTPCKQPR 214
>BC010409-1|AAH10409.3| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>BC007628-1|AAH07628.1| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = -2
Query: 503 RLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLRLQVPGWRPGEQARRLEGDS 324
R++H PPR + P PPR R+R P P +AR G S
Sbjct: 179 RIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGASPRRVRHDSPDPSPPRRAR--HGSS 236
Query: 323 AVSSDRPDRDRALRTSQR 270
+SS R + + TS+R
Sbjct: 237 DISSPRRVHNNSPDTSRR 254
>BC002539-1|AAH02539.3| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>AJ297363-1|CAB95948.1| 101|Homo sapiens hypothetical protein
protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 264 RSCGSGRGTIREPRIVPSTAPPPSNVSLSSTIF 166
R+CG G+ + +P+I PS+ P P + + ++F
Sbjct: 17 RACGQGKEELVDPQIAPSSPPLPFCLEVPGSVF 49
>AF202321-1|AAF27048.1| 400|Homo sapiens keratin 19 protein.
Length = 400
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 257 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 305
>AB041267-1|BAA94607.1| 208|Homo sapiens keratin 19 protein.
Length = 208
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 53 EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEG 199
EVM E + D T EL ++ HT L + ++ +LR TL+G
Sbjct: 113 EVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQG 161
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGF 158
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich
protein protein.
Length = 236
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = -2
Query: 506 PRLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLRLQVPGWRPGEQARRLEGD 327
PR G P+ PP+ G P PP K PP G R + P +P Q +GD
Sbjct: 56 PRSPPGKPQGPPPQGGNQPQGPP-PPPGKPQGPPPQGGNRPQGPPPPGKP--QGPPPQGD 112
Query: 326 SAVSSDRPDR 297
+ S P R
Sbjct: 113 KSRSPRSPPR 122
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGF 162
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 125 CAICGDRSSGKHYGVYSCEGCKGF 148
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 30.7 bits (66), Expect = 6.8
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Frame = -2
Query: 623 HLRQPEGEASAVAAHPVREN---RADRLDGTEAGRRVRQ----AARPRLQHGPPRLEPPR 465
++R+P G + PV+ AD E GR VRQ RPR + GPP PR
Sbjct: 193 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPLQRQPR 252
Query: 464 SN 459
+
Sbjct: 253 ED 254
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGF 162
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGF 158
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 189 CAICGDRSSGKHYGVYSCEGCKGF 212
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGF 162
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGF 158
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGF 158
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGF 162
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 154 CAICGDRSSGKHYGVYSCEGCKGF 177
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 176 CAICGDRSSGKHYGVYSCEGCKGF 199
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGF 228
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 690 CHHCADRDQGRHSGTYXWXRCSGF 761
C C DR G+H G Y C GF
Sbjct: 245 CAICGDRSSGKHYGVYSCEGCKGF 268
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = -2
Query: 506 PRLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLRLQVPGWRPGEQARRLEGD 327
PR G P+ PP+ G P PP K PP G R + P +P Q +GD
Sbjct: 117 PRSPPGKPQGPPPQGGNQPQGPP-PPPGKPQGPPQQGGNRPQGPPPPGKP--QGPPPQGD 173
Query: 326 SAVSSDRP 303
+ S P
Sbjct: 174 KSQSPQSP 181
>K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich
protein precursor protein.
Length = 247
Score = 30.3 bits (65), Expect = 8.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 LDGTEAGRRVR---QAARPRLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLR 381
+ G GRR + Q RP G P+ PP+ G P PP PP G++
Sbjct: 32 ISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQS-- 89
Query: 380 LQVPGWRPGEQAR 342
Q P PG+ R
Sbjct: 90 -QGPPPHPGKPER 101
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 30.3 bits (65), Expect = 8.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 LDGTEAGRRVR---QAARPRLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLR 381
+ G GRR + Q RP G P+ PP+ G P PP PP G++
Sbjct: 32 ISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQS-- 89
Query: 380 LQVPGWRPGEQAR 342
Q P PG+ R
Sbjct: 90 -QGPPPHPGKPER 101
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 30.3 bits (65), Expect = 8.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 LDGTEAGRRVR---QAARPRLQHGPPRLEPPRSNYSFAGAPFPPRAKLATPPVIGSERLR 381
+ G GRR + Q RP G P+ PP+ G P PP PP G++
Sbjct: 32 ISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQS-- 89
Query: 380 LQVPGWRPGEQAR 342
Q P PG+ R
Sbjct: 90 -QGPPPHPGKPER 101
>BC127099-1|AAI27100.1| 649|Homo sapiens KIAA1683 protein protein.
Length = 649
Score = 30.3 bits (65), Expect = 8.9
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 608 EGEASAVAAHPVRENRADRLDGTEAGRRVRQAA-RP-RLQ-HGPPRLEPPRSNYSFAGAP 438
EG++ R N+A R T RR QA RP R Q GP + E P++ + P
Sbjct: 275 EGDSVKTKRVTARTNKA-RAPETPLSRRYDQAVTRPSRAQTQGPVKAETPKAPFQICPGP 333
Query: 437 FPPRAKLATPPVI 399
+ L T PV+
Sbjct: 334 MITKTLLQTYPVV 346
>BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.
Length = 1367
Score = 30.3 bits (65), Expect = 8.9
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 608 EGEASAVAAHPVRENRADRLDGTEAGRRVRQAA-RP-RLQ-HGPPRLEPPRSNYSFAGAP 438
EG++ R N+A R T RR QA RP R Q GP + E P++ + P
Sbjct: 275 EGDSVKTKRVTARTNKA-RAPETPLSRRYDQAVTRPSRAQTQGPVKAETPKAPFQICPGP 333
Query: 437 FPPRAKLATPPVI 399
+ L T PV+
Sbjct: 334 MITKTLLQTYPVV 346
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 545 GTEAGRRVRQAARPRLQHGPPRLEPPRSNYSFAGA 441
G +A RR RQ AR PP L R +Y F G+
Sbjct: 3307 GLQASRRSRQPARHPACMLPPHLRTTRDSYQFGGS 3341
>AK057466-1|BAB71500.1| 554|Homo sapiens protein ( Homo sapiens
cDNA FLJ32904 fis, clone TESTI2005690, weakly similar to
ENVELOPE GLYCOPROTEIN GP340. ).
Length = 554
Score = 30.3 bits (65), Expect = 8.9
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 608 EGEASAVAAHPVRENRADRLDGTEAGRRVRQAA-RP-RLQ-HGPPRLEPPRSNYSFAGAP 438
EG++ R N+A R T RR QA RP R Q GP + E P++ + P
Sbjct: 275 EGDSVKTKRVTARTNKA-RAPETPLSRRYDQAVTRPSRAQTQGPVKAETPKAPFQICPGP 333
Query: 437 FPPRAKLATPPVI 399
+ L T PV+
Sbjct: 334 MITKTLLQTYPVV 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,154,122
Number of Sequences: 237096
Number of extensions: 2598242
Number of successful extensions: 11050
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 9532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10985
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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