Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E06
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 322 3e-88
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 322 3e-88
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 322 3e-88
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 322 3e-88
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 265 3e-71
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 265 3e-71
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 120 2e-27
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 120 2e-27
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 322 bits (790), Expect = 3e-88
Identities = 140/200 (70%), Positives = 168/200 (84%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 589
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWATXHLEKPI 649
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARA 269
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 322 bits (790), Expect = 3e-88
Identities = 140/200 (70%), Positives = 168/200 (84%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 589
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWATXHLEKPI 649
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARA 269
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 322 bits (790), Expect = 3e-88
Identities = 140/200 (70%), Positives = 168/200 (84%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 589
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWATXHLEKPI 649
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARA 269
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 322 bits (790), Expect = 3e-88
Identities = 140/200 (70%), Positives = 168/200 (84%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 589
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWATXHLEKPI 649
NGGTIE KV WA HLEK +
Sbjct: 186 NGGTIEQKVDWAREHLEKQV 205
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARA 269
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 265 bits (649), Expect = 3e-71
Identities = 115/163 (70%), Positives = 136/163 (83%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQM 538
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 663 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
V A +MID I SRWHTK LPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 265 bits (649), Expect = 3e-71
Identities = 115/163 (70%), Positives = 136/163 (83%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 KKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQM 538
KKKAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 663 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
V A +MID I SRWHTK LPR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPR 194
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 120 bits (288), Expect = 2e-27
Identities = 53/83 (63%), Positives = 67/83 (80%)
Frame = +2
Query: 401 YKCKKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 580
Y+ + KAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 581 IQLNGGTIEDKVKWATXHLEKPI 649
IQ+NGGTIE KV WA HLEK +
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQV 107
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 143 PRKTHKGLRKVACIGAWHPSRVAFTVARA 171
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 120 bits (288), Expect = 2e-27
Identities = 53/83 (63%), Positives = 67/83 (80%)
Frame = +2
Query: 401 YKCKKKAFTKASXKWQDELGRKSIEKDFXXMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 580
Y+ + KAFTK + KWQDE G+K IE DF + +YCS +RVIAHTQMK+L++RQKKAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 581 IQLNGGTIEDKVKWATXHLEKPI 649
IQ+NGGTIE KV WA HLEK +
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQV 107
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 757 PVKTHXGLXKVACIGAWHPSRVSFTVXRA 843
P KTH GL KVACIGAWHPSRV+FTV RA
Sbjct: 143 PRKTHKGLRKVACIGAWHPSRVAFTVARA 171
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPVHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 657 DSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKXLPR 761
D+VFAQDEMID I SRWHTK LPR
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 275 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 403
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 256 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 423
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,511,387
Number of Sequences: 27780
Number of extensions: 413678
Number of successful extensions: 1006
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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