Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E04
(854 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 49 6e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 39 5e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 36 4e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 35 8e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.004
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.018
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.17
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.29
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.1 bits (139), Expect = 3e-11
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 331
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 332 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTF 499
PD+VL N A G+Y +R + + NG V W+ + ++ + +P QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 500 KFGSRMHNSDEMDXVI 547
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V++NGS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V++NGS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V++NGS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V+++GS ++ + M + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V+++GS ++ + M + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.6 bits (133), Expect = 1e-10
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 331
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 332 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFG 508
PD+VL N A A +A + + G V W + + ++ +P QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 509 SRMHNSDEMD 538
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 412
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 413 VSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMD 538
V W + + ++ +P QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V+++GS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +2
Query: 239 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 403
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 404 NGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMD 538
G VSW + + ++ +P Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V+++GS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVI 547
G Y V+++GS ++ + + + +P Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 4e-10
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +2
Query: 161 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 328
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 329 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKF 505
PD+VL N A G + +A + G V W + + + +P QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 506 GSRMHNSDEMD 538
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 7e-10
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 331
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 332 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTF 499
PD+VL N A G+Y + +A V +G V W + S+ ++ +P +QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 500 KFGSRMHNSDEMD 538
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = +2
Query: 158 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLW 328
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 329 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTF 499
PD+ + N+ T G V ++GSVS + + + +WP C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 500 KFGSRMHNSDEMDXVIDXRIYSM 568
FGS +H+ +E++ +D + + M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 412
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 413 VSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMD 538
++ + + + +P Q C KFGS ++ ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.4 bits (120), Expect = 5e-09
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +2
Query: 128 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CST 301
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 302 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIXTPISMXLDN 469
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 470 WPNXMQTCTFKFGSRMHNSDEMD 538
+P QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +2
Query: 161 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 337
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 338 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGS 511
+L N A + VS+ G V W+ + + ++ +P Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 512 RMHNSDEMD 538
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 48.8 bits (111), Expect = 6e-08
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +2
Query: 200 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 370
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 371 GDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGS 511
R+ +G V + RL I M L+N+P Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Frame = +2
Query: 167 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVV 343
++ L ++H N+ E TV L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 344 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISMXLDN--WPNXMQTCTFKFGS 511
+ + + ++ V N+G++ + TP+ D+ WP + CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 512 RMHNSDEM 535
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.6 bits (98), Expect = 2e-06
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Frame = +2
Query: 143 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV 310
LP H K VV + +R + E + + + +W D RL + S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 311 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMXLDNWPNX 481
ER+WRPD N + + R+S +G + + RL I M L N+P
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 482 MQTCTFKFGS 511
Q+C GS
Sbjct: 173 RQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.1 bits (87), Expect = 5e-05
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Frame = +2
Query: 164 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 334
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 335 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKF 505
D+ N + + R+ NGSV + R+ + M L +P Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 506 GSRMHNSDEM 535
S +D++
Sbjct: 179 ASYGWTTDDL 188
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +2
Query: 251 WIDKRLXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 415
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 416 SWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEM 535
+ R+ + M L +P Q C+ + S +D++
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +2
Query: 200 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 379
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 380 ALR---ARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGS 511
R R+S +GSV++ R M L +P Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.1 bits (77), Expect = 8e-04
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Frame = +2
Query: 251 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 403
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 404 NGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGSRMHNSDEMDXVIDXRIYSMFELRS 583
+GS++ RL I M L +P Q C + S + + D R L+S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT------MRDIRYKWNAGLQS 176
Query: 584 VGCDGSVQLP 613
VG V+LP
Sbjct: 177 VGISNEVELP 186
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Frame = +2
Query: 251 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 403
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 404 NGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGS 511
+GS++ RL I M L +P Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Frame = +2
Query: 251 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 403
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 404 NGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFGS 511
+GS++ RL I M L +P Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +2
Query: 110 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 283
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 284 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 457
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 458 XLDNWPNXMQTCTFKFGS 511
L+ +P C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +2
Query: 110 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 283
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 284 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 457
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 458 XLDNWPNXMQTCTFKFGS 511
L+ +P C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 30.7 bits (66), Expect = 0.018
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +2
Query: 110 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 283
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 284 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISM 457
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 458 XLDNWPNXMQTCTFKFGS 511
L+ +P C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.018
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMXLDNWPNXMQ 487
+ +WRPD NA + T + + + ++ ++ +L + +M +P+ Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 488 TCTFKFGSRMHNSDEM 535
C + S H +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.5 bits (58), Expect = 0.17
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Frame = +2
Query: 161 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 334
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 335 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTCTFKFG 508
D ++ R+ NG+V+++ R + L+ +P C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 509 S 511
S
Sbjct: 257 S 257
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.6 bits (56), Expect = 0.29
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 323 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDIXTPISMXLDNWPNXMQTC 493
+W P V + N ++A T + + + +G V RL + L+ +P +Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 494 TFKFGSRMHNSDEM 535
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.2 bits (50), Expect = 1.6
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDIXTPISMXLDNWPNX 481
+ LW+PD LNA + AL + S+ N +V + R+ M +P
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 482 MQTCTFKFGSRMHNSDEM 535
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,936
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 80
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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