Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_E03
         (827 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA...    34   0.27 
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    33   0.63 
BT016122-1|AAV37007.1|  450|Drosophila melanogaster LD04326p pro...    29   5.9  
AE014296-1578|AAF50324.1|  450|Drosophila melanogaster CG4911-PA...    29   5.9  

>AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA
            protein.
          Length = 2262

 Score = 33.9 bits (74), Expect = 0.27
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 470  HHLPETRRPLHFDIPSSLPTKVDIXSVEPTDTSIEP-VYPGCDYKTVAALMMEPRD 634
            H LPE   P    +P+SLPT + I   +PTD   +P +      +TV A M++P D
Sbjct: 1470 HELPENLVPQGQSVPASLPTNLTI-QTQPTDLETQPSMELILQTETVDAEMVKPVD 1524


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 630  GTPTPLKSATMGSSPINFHGSISLMXMAPKPSAL*HPNMTRN-MTRLYFRPPLPKDSVSD 806
            G P+  K+ + GSSP+ +    +     P   A   P +  N +T  Y R PLP+ S S 
Sbjct: 968  GAPSGSKTPSQGSSPLKYQTPPT--TYPPPIEAYQCPKINPNFLTPKYERSPLPRSSTSS 1025

Query: 807  LPS 815
             PS
Sbjct: 1026 FPS 1028


>BT016122-1|AAV37007.1|  450|Drosophila melanogaster LD04326p
           protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 31  NVASVHXFLLLSXATTRSRSGVIFTGNHRLFQSR 132
           +VA  H F  L+    RS +GV F+  H LFQ R
Sbjct: 15  SVALNHIFDYLNPQDRRSAAGVCFSWRHALFQKR 48


>AE014296-1578|AAF50324.1|  450|Drosophila melanogaster CG4911-PA
           protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 31  NVASVHXFLLLSXATTRSRSGVIFTGNHRLFQSR 132
           +VA  H F  L+    RS +GV F+  H LFQ R
Sbjct: 15  SVALNHIFDYLNPQDRRSAAGVCFSWRHALFQKR 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,169,049
Number of Sequences: 53049
Number of extensions: 1023424
Number of successful extensions: 2604
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)