Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_E03
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 26 0.49
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.49
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 26 0.49
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 8.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 8.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 8.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 8.0
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.8 bits (54), Expect = 0.49
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 560 DTSIEPVYPGCDYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVD--LPYXNGAQ 718
D + P G V+ L++ PD +++ EF Q W D L Y N +Q
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.8 bits (54), Expect = 0.49
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 560 DTSIEPVYPGCDYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVD--LPYXNGAQ 718
D + P G V+ L++ PD +++ EF Q W D L Y N +Q
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.8 bits (54), Expect = 0.49
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 560 DTSIEPVYPGCDYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVD--LPYXNGAQ 718
D + P G V+ L++ PD +++ EF Q W D L Y N +Q
Sbjct: 75 DKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 605 VAALMMEPRDPDSLEIRHNGEFSNQFPWVD--LPYXNGAQ 718
V+ L++ PD +++ EF Q W D L Y N +Q
Sbjct: 141 VSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 180
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 250 KTILRGGSYDFSAYRSYQKRHHRMTNFKFDPAHIRAP 360
KTI +Y+ + Y +Y+K ++ + + P I P
Sbjct: 88 KTIHNNNNYNNNNYNNYKKLYYNINYIEQVPVPIPVP 124
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.4
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 351 DMSWIEFKIGHP 316
+MS I+FK+GHP
Sbjct: 569 NMSAIQFKLGHP 580
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 54 LATLXRHNSFPFWSHFYGKPSIVP 125
LA L RH W +G+P + P
Sbjct: 236 LARLERHLERKAWVASFGRPKMTP 259
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 772 K*SRVIFRVMFGCYN 728
K SR++F V F C+N
Sbjct: 406 KYSRIVFPVCFVCFN 420
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 772 K*SRVIFRVMFGCYN 728
K SR++F V F C+N
Sbjct: 406 KYSRIVFPVCFVCFN 420
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 250 KTILRGGSYDFSAYRSYQKRHHRMTNFK 333
KTI +Y+ + Y +Y ++ N+K
Sbjct: 88 KTIHNNNNYNNNNYNNYNYNNNNYNNYK 115
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 772 K*SRVIFRVMFGCYN 728
K SR++F V F C+N
Sbjct: 344 KYSRIVFPVCFVCFN 358
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,971
Number of Sequences: 438
Number of extensions: 6740
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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