Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_D22
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743...    30   2.1  
04_04_0921 - 29431812-29432786                                         29   4.9  

>03_02_0762 -
           10968888-10969466,10972522-10974175,10974277-10974359,
           10974435-10974533,10974620-10974706,10974782-10974838,
           10974939-10975065,10975344-10975465,10975685-10975732,
           10975867-10976268
          Length = 1085

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 492 YALRQLAQRHADLHVQVSVLGCTTSDEMDXRXFDXRIY 605
           Y+ R+  QRH DLH   S+L     D++D   +  R Y
Sbjct: 607 YSARRWQQRHDDLHGSHSMLKAEVCDDIDGHMYRERRY 644


>04_04_0921 - 29431812-29432786
          Length = 324

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 243 SPGPPCGYWQIFR*IGSTND*XGTQGNGAAALGWCPRNACGGLTW 377
           +PGP CG  + +R  GS +   G+ G GA    W    + G   W
Sbjct: 114 APGPFCGGGRRWRRCGSWSAVRGSGGRGARWAAWAGLCSSGRCAW 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,950,390
Number of Sequences: 37544
Number of extensions: 475688
Number of successful extensions: 1106
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)