Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D22
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 44 6e-04
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 44 6e-04
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 44 6e-04
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 44 6e-04
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 44 6e-04
X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for ... 42 0.003
BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor, n... 42 0.003
BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor, n... 42 0.003
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 40 0.012
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 40 0.012
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 40 0.012
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 40 0.016
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 40 0.016
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 40 0.016
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 40 0.016
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 40 0.016
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 40 0.016
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 40 0.016
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 40 0.016
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 40 0.016
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 40 0.016
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 40 0.016
Z23141-1|CAA80672.1| 479|Homo sapiens cholinergic receptor, nic... 39 0.021
Y08420-1|CAA69697.1| 502|Homo sapiens nicotinic acetylcholine r... 39 0.021
X70297-1|CAA49778.1| 502|Homo sapiens neuronal nicotinic acetyl... 39 0.021
U62436-1|AAB40114.1| 502|Homo sapiens nicotinic acetylcholine r... 39 0.021
U40583-1|AAA83561.1| 502|Homo sapiens alpha 7 neuronal nicotini... 39 0.021
AJ586911-1|CAE52911.1| 502|Homo sapiens nicotinic acetylcholine... 39 0.021
AF385585-1|AAK68111.1| 502|Homo sapiens nicotinic cholinergic r... 39 0.021
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 39 0.027
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 39 0.027
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 39 0.027
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 39 0.027
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 39 0.027
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 39 0.027
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 39 0.027
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 39 0.027
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 39 0.027
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 39 0.027
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 39 0.027
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 39 0.027
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 39 0.027
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 39 0.027
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 38 0.048
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 38 0.048
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 38 0.048
BC113575-1|AAI13576.1| 479|Homo sapiens cholinergic receptor, n... 38 0.048
BC113549-1|AAI13550.1| 479|Homo sapiens cholinergic receptor, n... 38 0.048
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 38 0.048
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 38 0.048
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 38 0.048
AY123244-1|AAM74523.1| 479|Homo sapiens nicotinic acetylcholine... 38 0.048
AJ243342-1|CAB65091.1| 479|Homo sapiens nicotinic acetylcholine... 38 0.048
AF227732-1|AAF61920.1| 470|Homo sapiens nicotinic acetylcholine... 38 0.048
AC118275-1|AAY40986.1| 479|Homo sapiens unknown protein. 38 0.048
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 38 0.048
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 38 0.048
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 37 0.084
Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine r... 37 0.11
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 37 0.11
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 37 0.11
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 37 0.11
U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine r... 37 0.11
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 37 0.11
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 37 0.11
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 37 0.11
BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor, n... 37 0.11
AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic acet... 37 0.11
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 37 0.11
M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha ... 36 0.26
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 35 0.45
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 35 0.45
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 35 0.45
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 35 0.45
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 35 0.45
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 35 0.45
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 35 0.45
AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic acet... 33 1.0
AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic acet... 33 1.0
AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine... 33 1.0
AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine... 33 1.0
Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine r... 30 9.6
X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25... 30 9.6
U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine r... 30 9.6
BC110597-1|AAI10598.1| 411|Homo sapiens ligand-gated ion channe... 30 9.6
BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor, n... 30 9.6
BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor, n... 30 9.6
AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor, n... 30 9.6
AK122638-1|BAC85499.1| 266|Homo sapiens yte protein of 76kDa) (... 30 9.6
AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein. 30 9.6
AF512521-1|AAO20969.1| 411|Homo sapiens ligand-gated ion channe... 30 9.6
AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic acet... 30 9.6
AB223030-1|BAE19924.1| 411|Homo sapiens ligand-gated ion-channe... 30 9.6
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++ V L L ++ N+ E V L+ W+D L WN ++G + + SE++WRP
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 371 DVVLLN 388
D+VL N
Sbjct: 109 DLVLYN 114
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++ V L L ++ N+ E V L+ W+D L WN ++G + + SE++WRP
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 371 DVVLLN 388
D+VL N
Sbjct: 109 DLVLYN 114
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++ V L L ++ N+ E V L+ W+D L WN ++G + + SE++WRP
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 371 DVVLLN 388
D+VL N
Sbjct: 109 DLVLYN 114
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++ V L L ++ N+ E V L+ W+D L WN ++G + + SE++WRP
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 371 DVVLLN 388
D+VL N
Sbjct: 109 DLVLYN 114
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++ V L L ++ N+ E V L+ W+D L WN ++G + + SE++WRP
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 371 DVVLLN 388
D+VL N
Sbjct: 109 DLVLYN 114
>X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor beta-subunit. ).
Length = 501
Score = 41.9 bits (94), Expect = 0.003
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-G 328
SS R + ++ V L L L N ++ + ++ DL+ W D RL W+ E G
Sbjct: 40 SSVRPAREVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDG 97
Query: 329 CSTWLVSSERLWRPDVVLLN 388
+ +++E +W PDVVLLN
Sbjct: 98 IDSLRITAESVWLPDVVLLN 117
>BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 41.9 bits (94), Expect = 0.003
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-G 328
SS R + ++ V L L L N ++ + ++ DL+ W D RL W+ E G
Sbjct: 40 SSVRPAREVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDG 97
Query: 329 CSTWLVSSERLWRPDVVLLN 388
+ +++E +W PDVVLLN
Sbjct: 98 IDSLRITAESVWLPDVVLLN 117
>BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 41.9 bits (94), Expect = 0.003
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-G 328
SS R + ++ V L L L N ++ + ++ DL+ W D RL W+ E G
Sbjct: 40 SSVRPAREVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDLE--WTDYRLSWDPAEHDG 97
Query: 329 CSTWLVSSERLWRPDVVLLN 388
+ +++E +W PDVVLLN
Sbjct: 98 IDSLRITAESVWLPDVVLLN 117
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 39.9 bits (89), Expect = 0.012
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 200 VVNLTLHLRHANI-----RESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERL 361
VVN++L L N+ RE T + ++M W D RL W+ ++ G V S +
Sbjct: 53 VVNVSLKLTLTNLISLNEREEALTTNVW--IEMQWCDYRLRWDPRDYEGLWVLRVPSTMV 110
Query: 362 WRPDVVLLN 388
WRPD+VL N
Sbjct: 111 WRPDIVLEN 119
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 39.9 bits (89), Expect = 0.012
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 200 VVNLTLHLRHANI-----RESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERL 361
VVN++L L N+ RE T + ++M W D RL W+ ++ G V S +
Sbjct: 50 VVNVSLKLTLTNLISLNEREEALTTNVW--IEMQWCDYRLRWDPRDYEGLWVLRVPSTMV 107
Query: 362 WRPDVVLLN 388
WRPD+VL N
Sbjct: 108 WRPDIVLEN 116
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 39.9 bits (89), Expect = 0.012
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 200 VVNLTLHLRHANI-----RESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERL 361
VVN++L L N+ RE T + ++M W D RL W+ ++ G V S +
Sbjct: 53 VVNVSLKLTLTNLISLNEREEALTTNVW--IEMQWCDYRLRWDPRDYEGLWVLRVPSTMV 110
Query: 362 WRPDVVLLN 388
WRPD+VL N
Sbjct: 111 WRPDIVLEN 119
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G T L V SE +W PD+VL N
Sbjct: 111 LKQEWSDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYN 149
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 39.5 bits (88), Expect = 0.016
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G T L V SE +W PD+VL N
Sbjct: 111 LKQEWSDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYN 149
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
I + L+L L N RE T + L+ W D RL WN+ + G + + ++R+W P
Sbjct: 56 IKLQLSLAQLISVNEREQIMTTNVW--LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 113
Query: 371 DVVLLN 388
D+VL N
Sbjct: 114 DIVLYN 119
>Z23141-1|CAA80672.1| 479|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 7 protein.
Length = 479
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 55 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 93
>Y08420-1|CAA69697.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha7 subunit precursor protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>X70297-1|CAA49778.1| 502|Homo sapiens neuronal nicotinic
acetylocholine receptor alpha-7 subunit protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>U62436-1|AAB40114.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha7 subunit precursor protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>U40583-1|AAA83561.1| 502|Homo sapiens alpha 7 neuronal nicotinic
acetylcholine receptor protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>AJ586911-1|CAE52911.1| 502|Homo sapiens nicotinic acetylcholine
alpha-7 subunit protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>AF385585-1|AAK68111.1| 502|Homo sapiens nicotinic cholinergic
receptor alpha 7 protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.021
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
LQM+W D L WN E+ G T ++W+PD++L N
Sbjct: 78 LQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYN 116
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 85 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 123
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 38.7 bits (86), Expect = 0.027
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ W D RL WN+ + G + + ++R+W PD+VL N
Sbjct: 34 LKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVLYN 72
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 56 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 94
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 86 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 124
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 85 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 123
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 86 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 124
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 87 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 86 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 124
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.027
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN ++G + ++ V ++++W+PD+VL N
Sbjct: 81 LKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 119
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 ANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
AN+ E + L+ W D +L W+ E+ G T V ++++W+PD+VL N
Sbjct: 71 ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 188 HSKIVVNLTLHLRHANI---RESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSE 355
H + V++ L L +N+ +E T+ ++ W D RL WNA E+G S + +
Sbjct: 47 HKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPD 106
Query: 356 RLWRPDVVLLN 388
+W P++VL N
Sbjct: 107 MVWLPEIVLEN 117
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 ANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
AN+ E + L+ W D +L W+ E+ G T V ++++W+PD+VL N
Sbjct: 71 ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>BC113575-1|AAI13576.1| 479|Homo sapiens cholinergic receptor,
nicotinic, alpha 9 protein.
Length = 479
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 55 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 114
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 115 PDIVLYN 121
>BC113549-1|AAI13550.1| 479|Homo sapiens cholinergic receptor,
nicotinic, alpha 9 protein.
Length = 479
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 55 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 114
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 115 PDIVLYN 121
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 188 HSKIVVNLTLHLRHANI---RESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSE 355
H + V++ L L +N+ +E T+ ++ W D RL WNA E+G S + +
Sbjct: 47 HKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPD 106
Query: 356 RLWRPDVVLLN 388
+W P++VL N
Sbjct: 107 MVWLPEIVLEN 117
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 188 HSKIVVNLTLHLRHANI---RESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSE 355
H + V++ L L +N+ +E T+ ++ W D RL WNA E+G S + +
Sbjct: 47 HKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPD 106
Query: 356 RLWRPDVVLLN 388
+W P++VL N
Sbjct: 107 MVWLPEIVLEN 117
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 ANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
AN+ E + L+ W D +L W+ E+ G T V ++++W+PD+VL N
Sbjct: 71 ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>AY123244-1|AAM74523.1| 479|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 9 protein.
Length = 479
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 55 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 114
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 115 PDIVLYN 121
>AJ243342-1|CAB65091.1| 479|Homo sapiens nicotinic acetylcholine
receptor alpha 9 subunit protein.
Length = 479
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 55 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 114
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 115 PDIVLYN 121
>AF227732-1|AAF61920.1| 470|Homo sapiens nicotinic acetylcholine
receptor alpha 9 subunit protein.
Length = 470
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 49 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 108
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 109 PDIVLYN 115
>AC118275-1|AAY40986.1| 479|Homo sapiens unknown protein.
Length = 479
Score = 37.9 bits (84), Expect = 0.048
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+TL + + I++ +IL ++ W D L W+ ++ G + + S+ +WR
Sbjct: 55 VLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWR 114
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 115 PDIVLYN 121
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 188 HSKIVVNLTLHLRHANI---RESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSE 355
H + V++ L L +N+ +E T+ ++ W D RL WNA E+G S + +
Sbjct: 47 HKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPD 106
Query: 356 RLWRPDVVLLN 388
+W P++VL N
Sbjct: 107 MVWLPEIVLEN 117
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 ANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
AN+ E + L+ W D +L W+ E+ G T V ++++W+PD+VL N
Sbjct: 71 ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.084
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D +L WN +G + ++ V ++++W+PD+VL N
Sbjct: 84 LKQIWNDYKLKWNPSGYGGAEFMRVPAQKIWKPDIVLYN 122
>Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ WID +L WN ++ G V S+ +W PD+VL +
Sbjct: 99 LKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 46 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 82
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ WID +L WN ++ G V S+ +W PD+VL +
Sbjct: 99 LKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor,
nicotinic, alpha 5 protein.
Length = 468
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ WID +L WN ++ G V S+ +W PD+VL +
Sbjct: 99 LKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-5subunit protein.
Length = 468
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ WID +L WN ++ G V S+ +W PD+VL +
Sbjct: 99 LKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 36.7 bits (81), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL 382
L+ W D +L WN ++ G + V SE LW PD+VL
Sbjct: 81 LKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVL 117
>M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha 5
subunit protein.
Length = 468
Score = 35.5 bits (78), Expect = 0.26
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L+ WID +L WN ++ G V S+ W PD+VL +
Sbjct: 99 LKQEWIDVKLRWNPDDYGGIKVIRVPSDSSWTPDIVLFD 137
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 64 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 102
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.45
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ ++ T + + SE +WRPD+VL N
Sbjct: 89 VKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
>AJ295237-1|CAC16144.1| 450|Homo sapiens neuronal nicotinic
acetylcholine receptor subunit4 protein.
Length = 450
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-C 331
S+ R V + + +TL + ++ E + + ++ W D L W+ +G
Sbjct: 43 SALRPVADTDQTLNVTLEVTLS-QIIDMDERNQVLTLYLWIRQEWTDAYLRWDPNAYGGL 101
Query: 332 STWLVSSERLWRPDVVLLN 388
+ S +WRPD+VL N
Sbjct: 102 DAIRIPSSLVWRPDIVLYN 120
>AJ278118-1|CAC20435.1| 450|Homo sapiens neuronal nicotinic
acetylcholine alpha10 subunit protein.
Length = 450
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-C 331
S+ R V + + +TL + ++ E + + ++ W D L W+ +G
Sbjct: 43 SALRPVADTDQTLNVTLEVTLS-QIIDMDERNQVLTLYLWIRQEWTDAYLRWDPNAYGGL 101
Query: 332 STWLVSSERLWRPDVVLLN 388
+ S +WRPD+VL N
Sbjct: 102 DAIRIPSSLVWRPDIVLYN 120
>AF327367-1|AAK14333.1| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-C 331
S+ R V + + +TL + ++ E + + ++ W D L W+ +G
Sbjct: 43 SALRPVADTDQTLNVTLEVTLS-QIIDMDERNQVLTLYLWIRQEWTDAYLRWDPNAYGGL 101
Query: 332 STWLVSSERLWRPDVVLLN 388
+ S +WRPD+VL N
Sbjct: 102 DAIRIPSSLVWRPDIVLYN 120
>AF199235-1|AAG00795.2| 450|Homo sapiens nicotinic acetylcholine
receptor subunit alpha 10 protein.
Length = 450
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 155 SSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-C 331
S+ R V + + +TL + ++ E + + ++ W D L W+ +G
Sbjct: 43 SALRPVADTDQTLNVTLEVTLS-QIIDMDERNQVLTLYLWIRQEWTDAYLRWDPNAYGGL 101
Query: 332 STWLVSSERLWRPDVVLLN 388
+ S +WRPD+VL N
Sbjct: 102 DAIRIPSSLVWRPDIVLYN 120
>Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25 to
477) protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>BC110597-1|AAI10598.1| 411|Homo sapiens ligand-gated ion channel,
zinc activated 1 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLL 385
L+++W+D RL WN + E LW P + +L
Sbjct: 86 LRLSWLDTRLAWNTSAHPRHAITLPWESLWTPRLTIL 122
>BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>AK122638-1|BAC85499.1| 266|Homo sapiens yte protein of 76kDa)
(LCP2). protein.
Length = 266
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLL 385
L+++W+D RL WN + E LW P + +L
Sbjct: 87 LRLSWLDTRLAWNTSAHPRHAITLPWESLWTPRLTIL 123
>AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein.
Length = 504
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>AF512521-1|AAO20969.1| 411|Homo sapiens ligand-gated ion channel
subunit protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLL 385
L+++W+D RL WN + E LW P + +L
Sbjct: 86 LRLSWLDTRLAWNTSAHPRHAITLPWESLWTPRLTIL 122
>AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 2 protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L W D RL W E+ + S+ +W PDVVL N
Sbjct: 83 LTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYN 121
>AB223030-1|BAE19924.1| 411|Homo sapiens ligand-gated ion-channel
receptor L2 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLL 385
L+++W+D RL WN + E LW P + +L
Sbjct: 86 LRLSWLDTRLAWNTSAHPRHAITLPWESLWTPRLTIL 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,528,504
Number of Sequences: 237096
Number of extensions: 2536390
Number of successful extensions: 4781
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 4529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4725
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -