Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D22
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 40 0.003
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 40 0.006
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 40 0.006
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 39 0.010
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 39 0.010
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 39 0.010
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 38 0.014
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 38 0.018
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 38 0.018
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 38 0.018
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 38 0.018
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 38 0.018
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 38 0.018
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 38 0.018
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 38 0.018
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 38 0.018
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 38 0.018
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 38 0.018
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 37 0.032
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 37 0.032
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 37 0.032
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 37 0.032
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 37 0.032
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 37 0.042
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 37 0.042
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 37 0.042
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 36 0.056
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 36 0.056
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 36 0.056
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 36 0.056
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 36 0.074
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 36 0.074
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 36 0.074
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 36 0.074
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 36 0.097
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 36 0.097
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 36 0.097
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 36 0.097
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 36 0.097
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 36 0.097
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 36 0.097
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.097
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 36 0.097
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 36 0.097
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 31 2.1
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 31 2.8
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 40.3 bits (90), Expect = 0.003
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CST 337
R VG+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 338 WLVSSERLWRPDVVLLN 388
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWHPDIVLYN 115
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 39.5 bits (88), Expect = 0.006
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 367
K+ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 368 PDVVLLN 388
PD+VL N
Sbjct: 125 PDIVLYN 131
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTL-HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CST 337
R VG+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 338 WLVSSERLWRPDVVLLN 388
V SE +W PD+VL N
Sbjct: 99 LHVPSEHIWLPDIVLYN 115
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 97
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 38.3 bits (85), Expect = 0.014
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 104 VRQNAKTQHHCPS*STRSSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQM 283
+R ++ + + + SS + + L HS I + + L+L E + L++
Sbjct: 263 LRSSSSSSSNSSNSGNSSSTQILNGLNKHSWIFLLIYLNLSD----EKNQLLVTNVWLKL 318
Query: 284 NWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
W D L WN ++ G + R+W+PDV++ N
Sbjct: 319 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 354
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 129
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 132
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 37.1 bits (82), Expect = 0.032
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.032
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 161 QRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCST 337
+R V + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 338 WLVSSERLWRPDVVLLN 388
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.032
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 161 QRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCST 337
+R V + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 338 WLVSSERLWRPDVVLLN 388
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 37.1 bits (82), Expect = 0.032
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 161 QRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCST 337
+R V + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 338 WLVSSERLWRPDVVLLN 388
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.032
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 161 QRTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCST 337
+R V + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 338 WLVSSERLWRPDVVLLN 388
++ +LW+PDV++ N
Sbjct: 104 LRITPNKLWKPDVLMYN 120
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 36.7 bits (81), Expect = 0.042
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 36.7 bits (81), Expect = 0.042
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 36.7 bits (81), Expect = 0.042
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 36.3 bits (80), Expect = 0.056
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE +W PD+VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.074
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 35.9 bits (79), Expect = 0.074
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 402
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.074
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.074
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 134
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.5 bits (78), Expect = 0.097
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +2
Query: 80 FSSLVL*LVRQNAKTQHHCPS*STRSSQRTVGSLPPHSKIVVNLTLHLRHANIRESGSTV 259
+ S + +V++ KT+ S + Q S+P + + + R ++ S +
Sbjct: 202 YGSEIAPIVKEETKTEKLL---SHLNIQAENASMPANLSSI-SFHFQTRSLAYEQTSSLL 257
Query: 260 RILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
+ + M+W D RL W ++G ++ R+W+P + +LN
Sbjct: 258 QTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLN 301
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 VNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVV 379
++ R ++ S ++ + M+W D RL W ++G ++ R+W+P +
Sbjct: 42 ISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMN 101
Query: 380 LLN 388
+LN
Sbjct: 102 VLN 104
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,519,531
Number of Sequences: 53049
Number of extensions: 750326
Number of successful extensions: 1545
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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