Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D22
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 44 2e-04
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 44 2e-04
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 42 8e-04
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 42 8e-04
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 42 8e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 41 0.001
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 40 0.002
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 40 0.002
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 40 0.002
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 39 0.004
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 39 0.004
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 39 0.005
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 38 0.007
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 38 0.007
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 38 0.009
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 38 0.009
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 38 0.009
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 38 0.009
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.009
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.009
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 38 0.013
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 38 0.013
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 38 0.013
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 38 0.013
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 38 0.013
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 38 0.013
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 37 0.017
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 37 0.017
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 37 0.022
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 37 0.022
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 37 0.022
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 37 0.022
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 36 0.038
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 36 0.038
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.038
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 36 0.050
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 36 0.050
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 36 0.050
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 35 0.067
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 35 0.067
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 35 0.067
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 35 0.067
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 35 0.067
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 35 0.067
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 35 0.088
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.088
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.088
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 34 0.12
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 34 0.12
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 34 0.12
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 34 0.12
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 34 0.12
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 34 0.15
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 33 0.20
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.27
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.27
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 33 0.36
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 32 0.47
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 32 0.62
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 32 0.62
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 31 1.1
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 31 1.1
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 31 1.4
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 31 1.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 30 1.9
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 30 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.8
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 46.4 bits (105), Expect = 3e-05
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+M W DK+L WN +WG ++ + S+++W PD+VL N
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
N+ E ++ L M W D +L WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
N+ E ++ L M W D +L WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 41.9 bits (94), Expect = 6e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
L +NW+D RL WN W + R+W+PD++L+N
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVN 203
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG--CSTWLVSS 352
PP + V L L H I E T+ +L + +W+D L W+ +G TW +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTW-IPL 141
Query: 353 ERLWRPDVVLLN 388
+++W PD+++ N
Sbjct: 142 DKIWVPDIIVFN 153
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ E + + L +W+D RL WN E+G T + E LW PD++L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYN 96
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
L+M W D RL W+ G WG L V +++W PD++L N
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN 115
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 176 SLPPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVS 349
S P+ + + L L L ++ E + L+ WID++L W+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 350 SERLWRPDVVLLN 388
E +W PD+VL N
Sbjct: 105 YEMIWVPDIVLYN 117
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 176 SLPPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVS 349
S P+ + + L L L ++ E + L+ WID++L W+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 350 SERLWRPDVVLLN 388
E +W PD+VL N
Sbjct: 105 YEMIWVPDIVLYN 117
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 176 SLPPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVS 349
S P+ + + L L L ++ E + L+ WID++L W+ + G + V
Sbjct: 45 STSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVP 104
Query: 350 SERLWRPDVVLLN 388
E +W PD+VL N
Sbjct: 105 YEMIWVPDIVLYN 117
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 370
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 371 DVVLLN 388
DVVL N
Sbjct: 112 DVVLYN 117
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 370
+VV L L ++ E + LQ +W+D +L W+ E+G V S+ +W P
Sbjct: 52 LVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLP 111
Query: 371 DVVLLN 388
DVVL N
Sbjct: 112 DVVLYN 117
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCS-TWLVSS 352
PP ++ ++ + L H I E +++L + W D L W E+ G TWL
Sbjct: 86 PPDGRVDISHNIELVHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PE 144
Query: 353 ERLWRPDVVLLN 388
+W PD+++ N
Sbjct: 145 HSIWIPDIIVFN 156
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 218 HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 376
+L+ ++E + ++ ++ W D RL WNA W +T + + +++W P +
Sbjct: 80 YLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIYMKQDKVWSPTI 133
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 188 HSKIVVNLTLHLRHANIRESGSTVRILAD---LQMNWIDKRLXWNAGEWGCSTWL-VSSE 355
HSK +N+T I + +IL ++++W+D +L W+ + T + + S+
Sbjct: 20 HSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSD 79
Query: 356 RLWRPDVVLLN 388
++W+PD++L N
Sbjct: 80 KIWKPDIILYN 90
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP KI + L L + N+ E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 344 -VSSERLWRPDVVLLN 388
V+ E++W PD+VL N
Sbjct: 114 RVAPEKVWLPDIVLFN 129
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP KI + L L + N+ E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 344 -VSSERLWRPDVVLLN 388
V+ E++W PD+VL N
Sbjct: 114 RVAPEKVWLPDIVLFN 129
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP KI + L L + N+ E + L M W D +L W+ ++ T +
Sbjct: 57 RNRSELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQI 113
Query: 344 -VSSERLWRPDVVLLN 388
V+ E++W PD+VL N
Sbjct: 114 RVAPEKVWLPDIVLFN 129
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 HSKIV-VNLTLHLRH-ANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
H K V V L L L+ ++ E + ++ Q W D +L W+ E+G T L +
Sbjct: 46 HRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLRWSPEEYGNITTLQIPHGT 105
Query: 359 LWRPDVVLLN 388
LW+PD++L N
Sbjct: 106 LWKPDILLFN 115
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTW-LVSSERLWRPDV 376
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTW-LVSSERLWRPDV 376
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
+ E V I L++ WID+ L W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 197 IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL---VSSERLW 364
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 365 RPDVVLLN 388
+PDV+L N
Sbjct: 113 KPDVLLYN 120
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 HSK-IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 359 LWRPDVVLLN 388
+W+PDV+L N
Sbjct: 104 IWKPDVLLYN 113
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
+ E V I L++ WID+ L W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 HSK-IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 359 LWRPDVVLLN 388
+W+PDV+L N
Sbjct: 104 IWKPDVLLYN 113
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 HSK-IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 359 LWRPDVVLLN 388
+W+PDV+L N
Sbjct: 104 IWKPDVLLYN 113
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 HSK-IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
HS+ + V+L + L+ ++ E V + A L W D L W+ E+G T + + +
Sbjct: 44 HSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGK 103
Query: 359 LWRPDVVLLN 388
+W+PDV+L N
Sbjct: 104 IWKPDVLLYN 113
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +2
Query: 191 SKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRP 370
+K+V ++ + + I E V++ ++W D + W+ +WG S ++W P
Sbjct: 83 TKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLSWLNFYWIQIWTP 142
Query: 371 DVVLLN 388
++V +N
Sbjct: 143 NIVQIN 148
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSER 358
PP +++ + + + L+ ++ E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 359 LWRPDVVL 382
+W P+V +
Sbjct: 110 IWLPEVTI 117
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 VNLTLHLRHAN-IRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVV 379
VN+ L + H + E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 380 LLN 388
L N
Sbjct: 114 LYN 116
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP K+ + L L + N+ E + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 344 -VSSERLWRPDVVLLN 388
VS +++W PD+VL N
Sbjct: 106 RVSPDKVWLPDIVLFN 121
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP K+ + L L + N+ E + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 344 -VSSERLWRPDVVLLN 388
VS +++W PD+VL N
Sbjct: 106 RVSPDKVWLPDIVLFN 121
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RTVGSLPPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL 343
R LP K+ + L L + N+ E + L + W D ++ WN +G +
Sbjct: 49 RNSSELPLIVKMALQLVLLI---NVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQI 105
Query: 344 -VSSERLWRPDVVLLN 388
VS +++W PD+VL N
Sbjct: 106 RVSPDKVWLPDIVLFN 121
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 197 IVVNLTLHLRH-ANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRP 370
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 371 DVVLLN 388
DV++ N
Sbjct: 111 DVLMYN 116
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 35.9 bits (79), Expect = 0.038
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +2
Query: 170 VGSLPPH----SKIVVNLT-LHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCS 334
+ S+PP+ + +N L+H + E + I L+++W D RL WN W +
Sbjct: 47 IASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKN 106
Query: 335 TWLVSS-ERLWRP 370
+V S +W P
Sbjct: 107 KLVVHSFHHIWVP 119
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 221 LRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
+R ++ E + L+M W D +L W ++G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 221 LRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
+R ++ E + L+M W D +L W ++G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.038
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 VNLTLHLRHAN-IRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVV 379
V + L++ H + E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 380 LLN 388
L N
Sbjct: 114 LYN 116
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 209 LTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
L +L+ ++E V ++ +L W D RL WN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHAN---IRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+T+ + N + E ++IL +W D L W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 368 PDVVLLN 388
PD + N
Sbjct: 120 PDGYIFN 126
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 200 VVNLTLHLRHAN---IRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
V+N+T+ + N + E ++IL +W D L W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 368 PDVVLLN 388
PD + N
Sbjct: 120 PDGYIFN 126
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 209 LTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
L +L+ ++E V ++ +L W D RL WN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
+ E+ + + ++ W D+ L WN ++G L V SE +W+PD+++ N
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
+ E+ + + ++ W D+ L WN ++G L V SE +W+PD+++ N
Sbjct: 64 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.067
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 203 VNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLV---SSERLWRP 370
V + L L+ ++ E V + A L W D +L W ++G + SS+ +W+P
Sbjct: 53 VKIKLFLQQILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKP 112
Query: 371 DVVLLN 388
DV+L N
Sbjct: 113 DVLLYN 118
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
+ E+ + + ++ W D+ L WN ++G L V SE +W+PD+++ N
Sbjct: 48 VHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 99
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 182 PPHSKIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSER 358
PP +I + L++ ++ + E L D + +W D RL W+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 359 LWRPDVVLLN 388
+W P+ +++
Sbjct: 138 VWIPETTIVD 147
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 370
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 371 DVVLLN 388
D L N
Sbjct: 138 DTYLYN 143
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 370
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 371 DVVLLN 388
D L N
Sbjct: 138 DTYLYN 143
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 34.7 bits (76), Expect = 0.088
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 370
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 371 DVVLLN 388
D L N
Sbjct: 138 DTYLYN 143
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 218 HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLWRP 370
+L+ + E V ++ +L W D RL WNA ++ T + + E++W P
Sbjct: 81 NLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIFTRQEKIWSP 132
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL N
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFN 117
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
N+ E ++ M W D ++ W+ E+ G T V +++W PD+VL N
Sbjct: 65 NVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFN 117
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 376
+V++ H+ H +I + T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 377 VLLN 388
+ N
Sbjct: 134 KVSN 137
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDV 376
+V++ H+ H +I + T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 377 VLLN 388
+ N
Sbjct: 134 KVSN 137
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 152 RSSQRTVGSLPPHSKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG 328
R + T+ S P +VV+L + L+ N+ E + + A L+ W D+ L W +
Sbjct: 35 REERPTLDSSKP---VVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLRWEPTAYE 91
Query: 329 CSTWL-VSSERLWRPDVVLLN 388
T L + LW PD++L N
Sbjct: 92 NVTDLRHPPDALWTPDILLYN 112
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 215 LHLRHAN-IRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 367
LH+ H + I++ +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 197 IVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LWRP 370
+++N++++ + + T+ ++ + W D+ L WN ++ TWL E LW P
Sbjct: 53 LIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 371 DVVL 382
D +
Sbjct: 112 DTTV 115
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
L+M+W D L W+ E+G + +W+PDV+L N
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYN 115
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
L+M+W D L W+ E+G + +W+PDV+L N
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYN 115
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 203 VNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDV 376
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 377 VLLN 388
L N
Sbjct: 193 YLYN 196
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 236 IRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
+ E +++L +W D L W+ EW G + +W PD + N
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFN 119
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 197 IVVNLTLH-LRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER-LWRP 370
+ +N++++ + + + T+ + + W D+ L WN ++ TWL E LW P
Sbjct: 53 LFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
Query: 371 DVVL 382
D +
Sbjct: 112 DTTV 115
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 242 ESGSTVRILADLQMNWIDKRLXWNAGEWGCST-WL-VSSERLWRPDVVLLN 388
++ T++ + + W D L WN W+ +S+ R W PDV+ N
Sbjct: 67 QTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +2
Query: 233 NIRESGSTVRILADLQMNWIDKRLXWNAGEWG------CSTWLVSSERLWRPDVVLLN 388
++ E + ILA + +W D +L W+ +G S +S +LWRPDV+L N
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFN 116
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +2
Query: 158 SQRTVGSLPPHSK---IVVNLTLHLRHANIRESGSTVRILADLQMNWIDKRLXWN-AGEW 325
S ++ + PP+S I + L ++ S + D+ +NW D+R+ W+ GE+
Sbjct: 54 SVHSLSAYPPNSDEMTITIENVLVKYVELVKGSSYQFNVFGDIYLNWKDERMKWDKKGEF 113
Query: 326 GC--STWLVSSERLWRPDVV 379
++ +S +W P V+
Sbjct: 114 ENYEHLYIFNSSAIWTPHVI 133
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 VRILADLQMNWIDKRLXWNAGEWG--CSTWLVSSERLWRPDVVLLN 388
+ + A L+ W D RL WN ++ S +++W+PD++L N
Sbjct: 77 IEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGEDQIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 VRILADLQMNWIDKRLXWNAGEWG--CSTWLVSSERLWRPDVVLLN 388
+ + A L+ W D RL WN ++ S +++W+PD++L N
Sbjct: 77 IEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGEDQIWQPDILLYN 122
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 191 SKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLW 364
S I V L+L L + E + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 365 RPDVVLLN 388
PD L N
Sbjct: 110 LPDTTLYN 117
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 191 SKIVVNLTLHLRHA-NIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWLVS-SERLW 364
S I V L+L L + E + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 365 RPDVVLLN 388
PD L N
Sbjct: 110 LPDTTLYN 117
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 221 LRHANIRESGSTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRP 370
L+ + E V ++ ++ W D RL WNA + T+ +W P
Sbjct: 81 LKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFYTRQSNVWSP 131
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 257 VRILADLQMNWIDKRLXWNAGEWGCST---WLVSSERLWRPDVVLLN 388
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYN 58
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLN 388
L M W D+RL N T + ++R+W PD+ +N
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVN 212
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 774 PPXPXXLWSPXXVGRXXXPPXXGFAPXLXLXTPPP 878
PP P +P V PP F+P + L PPP
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 218 HLRHANIRESGSTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVL 382
+L+ + E V ++ ++ W D R+ W++ +G L + +++W P + L
Sbjct: 80 YLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLHMRQDKVWSPTLSL 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,435,599
Number of Sequences: 27780
Number of extensions: 347565
Number of successful extensions: 974
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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