Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D21
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 57 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 8e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 1e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 49 7e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 9e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 44 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 39 7e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 33 0.004
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.004
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.18
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 5.1
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V++NGS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.2 bits (132), Expect = 2e-10
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Frame = +3
Query: 162 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVXSERLWR 335
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 336 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTF 503
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 504 KFGSRMHNTDEM 539
KFGS N D++
Sbjct: 168 KFGSWTFNGDQV 179
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.8 bits (131), Expect = 3e-10
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Frame = +3
Query: 162 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLW 332
+I N+T+ L + + S + + + + + W D L W ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 333 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTF 503
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 504 KFGSRMHNTDEMDXXIDK 557
FGS +H+ +E++ +DK
Sbjct: 186 NFGSWVHSGEEVNIFLDK 203
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V+++GS + + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V+++GS + + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +3
Query: 162 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VXSERLWR 335
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 336 PDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFG 512
PD+VL NA A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 513 SRMHNTDEMD 542
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 8e-10
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 243 LQMNWIDKRLXWNAGEWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 416
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 417 VSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
V + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 NIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 374
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G Y V+++GS + + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.8 bits (126), Expect = 1e-09
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +3
Query: 243 LQMNWIDKRLXWNAGEWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSN 407
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 408 NGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
G VS + + ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 243 LQMNWIDKRLXWNAGEWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 416
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 417 VSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEMD 542
+ + + + +P D Q C KFGS ++ ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +3
Query: 165 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VXSERLW 332
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 333 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKF 509
PD+VL N A G + +A + G V + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 510 GSRMHNTDEMD 542
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +3
Query: 162 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWL-VXSERLWR 335
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 336 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTF 503
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 504 KFGSRMHNTDEMD 542
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.0 bits (114), Expect = 3e-08
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +3
Query: 132 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CST 305
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 306 WLVXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDSSTPISMQLDN 473
V SE +W PD+VL N A G+Y + +A + + G V + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 474 WPNDMQTCTFKFGS 515
+P D QTC KFGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 48.8 bits (111), Expect = 7e-08
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +3
Query: 204 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVXSERLWRPDVVLLNAAAT---TA 374
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 375 GDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
R+ +G V RL M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.4 bits (110), Expect = 9e-08
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +3
Query: 171 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPDVV 347
++ L ++H N+ E TV L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 348 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISMQLDN--WPNDMQTCTFKFGS 515
+ + + ++ V N+G++ + + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 516 RMHNTDEM 539
H ++E+
Sbjct: 180 WSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +3
Query: 165 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVXSERLWRPD 341
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 342 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.4 bits (100), Expect = 1e-06
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Frame = +3
Query: 147 LPPHSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLV 314
LP H K VV + +R + E + + + +W D RL + S +
Sbjct: 53 LPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIK 112
Query: 315 XSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDSSTPISMQLDNWPND 485
ER+WRPD N + + R+S +G + RL M+L N+P D
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMD 172
Query: 486 MQTCTFKFGS 515
Q+C GS
Sbjct: 173 RQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 6/130 (4%)
Frame = +3
Query: 168 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLXWN--AGEWGCSTWLVXSERLWRP 338
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 339 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKF 509
D+ N + + R+ NGSV R+ + M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 510 GSRMHNTDEM 539
S TD++
Sbjct: 179 ASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 204 IRESESTVRILADLQMNWIDKRLXWNAGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDY 383
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 384 ALR---ARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
R R+S +GSV+ R ++ M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 38.7 bits (86), Expect = 7e-05
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +3
Query: 255 WIDKRLXWN--AGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 419
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 420 SXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEM 539
R+ + M L +P D Q C+ + S TD++
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +3
Query: 255 WIDKRLXWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 407
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 408 NGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
+GS++ RL + M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +3
Query: 255 WIDKRLXWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 407
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 408 NGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
+GS++ RL + M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.7 bits (76), Expect = 0.001
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +3
Query: 255 WIDKRLXWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 407
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 408 NGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGS 515
+GS++ RL + M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.002
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +3
Query: 213 SESTVRILAD--LQMNWIDKRLXW--NAGEWGCSTWLVXSERLWRPDVVLLNAAATTAGD 380
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 381 YALRAR---VSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFGSRMHNTDEM 539
++ + ++ ++ + +L +M+ +++P+D Q C+ S H T ++
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.004
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTC 497
+W P V + N ++A T + + + +G V RL ++ ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 498 TFKFGSRMHNTDEM 539
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 321 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDSSTPISMQLDNWPNDMQ 491
+ +WRPD NA + T + + + ++ + +L +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 492 TCTFKFGSRMHNTDEM 539
C + S H TDEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.014
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 114 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 287
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 288 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISM 461
++ + + +W PD ++ R+ NG+V+ + R
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 462 QLDNWPNDMQTCTFKFGS 515
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.014
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 114 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 287
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 288 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISM 461
++ + + +W PD ++ R+ NG+V+ + R
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 462 QLDNWPNDMQTCTFKFGS 515
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.014
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 114 STRSSQRTIGSLPPHSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 287
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 288 EWGCSTWLVXSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISM 461
++ + + +W PD ++ R+ NG+V+ + R
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 462 QLDNWPNDMQTCTFKFGS 515
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.9 bits (59), Expect = 0.13
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Frame = +3
Query: 165 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCSTWLVXSERLWRP 338
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 339 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDSSTPISMQLDNWPNDMQTCTFKFG 512
D ++ R+ NG+V+ + R +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 513 S 515
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.18
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 165 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLX-----WNAGEWGCSTWLVXSER 326
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 327 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDSSTPISMQLDNWPNDMQ 491
LW+PD LNA + AL + S+ N +V R+ + M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 492 TC 497
C
Sbjct: 129 IC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 106 GQ*CCVFAFCRTSYSTSEEKRVTRII 29
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,759
Number of Sequences: 438
Number of extensions: 4255
Number of successful extensions: 74
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -