Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D19
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 144 6e-35
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 37 0.023
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 34 0.16
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 33 0.22
10_08_0674 + 19788198-19789817 32 0.66
03_02_0251 - 6821612-6823405,6823738-6823878 32 0.66
02_05_0294 + 27609656-27611305 30 2.7
01_05_0541 - 23078460-23078597,23078745-23078903,23079264-230793... 30 2.7
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 29 4.7
04_04_0853 + 28745953-28747635 29 4.7
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 29 4.7
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 29 4.7
02_03_0371 - 18267986-18268378 29 6.2
02_01_0791 - 5930553-5930802,5931042-5932351 29 6.2
11_06_0661 - 26009838-26010950,26011302-26011802 28 8.2
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 144 bits (350), Expect = 6e-35
Identities = 77/147 (52%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
Frame = +1
Query: 142 QERGSPYTPDYRVFFKDEGG-PISPMHDIPLWADKAQRLVNMVVXVPXWTNAKMEISLGE 318
+E+G P T DYRVF D GG +SP HD+PL A + + VV +P ++AKME++ E
Sbjct: 54 KEQGLPETLDYRVFLVDGGGRKVSPWHDVPLRAGDG--VFHFVVEIPKESSAKMEVATDE 111
Query: 319 ALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT-GARGDNDPVDVI 495
+ PIKQD KKGNLR+ +P+ WNYG PQTWE+P + D GA GDNDPVDV+
Sbjct: 112 SFTPIKQDTKKGNLRY----YPYN-INWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDVV 166
Query: 496 EIGERVXSRGDVYPVKILGTLALIDEG 576
EIGER + GDV VK L LA+IDEG
Sbjct: 167 EIGERRANIGDVLKVKPLAALAMIDEG 193
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 36.7 bits (81), Expect = 0.023
Identities = 31/122 (25%), Positives = 54/122 (44%)
Frame = +1
Query: 211 PMHDIPLWADKAQRLVNMVVXVPXWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 390
P HD+ + D A + N+VV + + K E+ L +K + + + V+PH
Sbjct: 47 PWHDLEIGPD-APAVFNVVVEITKGSKVKYELDKKTGL------IKVDRILYSSVVYPH- 98
Query: 391 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVXSRGDVYPVKILGTLALID 570
NYG +P+T DNDP+DV+ + + G + +G + +ID
Sbjct: 99 ----NYGFIPRTLCE------------DNDPMDVLVLMQEPVLPGSFLRARAIGLMPMID 142
Query: 571 EG 576
+G
Sbjct: 143 QG 144
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/122 (24%), Positives = 53/122 (43%)
Frame = +1
Query: 211 PMHDIPLWADKAQRLVNMVVXVPXWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 390
P HD+ + A + N+VV + + K E+ L +K + + + V+PH
Sbjct: 36 PWHDLEI-GPGAPAVFNVVVEITKGSKVKYELDKKTGL------IKVDRVLYSSVVYPH- 87
Query: 391 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVXSRGDVYPVKILGTLALID 570
NYG +P+T DNDP+DV+ + + G + +G + +ID
Sbjct: 88 ----NYGFIPRTLCE------------DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMID 131
Query: 571 EG 576
+G
Sbjct: 132 QG 133
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 33.5 bits (73), Expect = 0.22
Identities = 30/122 (24%), Positives = 52/122 (42%)
Frame = +1
Query: 211 PMHDIPLWADKAQRLVNMVVXVPXWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 390
P HD+ + A + N VV +P + K E+ L +K + + + V+PH
Sbjct: 37 PWHDLEI-GPGAPAVFNCVVEIPRGSKVKYELDKATGL------IKVDRVLYSSVVYPH- 88
Query: 391 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVXSRGDVYPVKILGTLALID 570
NYG +P+T D DP+DV+ + + G + +G + +ID
Sbjct: 89 ----NYGFIPRTLCE------------DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMID 132
Query: 571 EG 576
+G
Sbjct: 133 QG 134
>10_08_0674 + 19788198-19789817
Length = 539
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1
Query: 566 MRASVPRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 417
+R S+P I TG L R ISM G L LA GS +GF+ + G
Sbjct: 57 LRLSLPMIMTGLI---LYIRPMISMLFLGRLGELALAGGSLAIGFANITG 103
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -1
Query: 563 RASVPRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 417
R SVP TG + +R+ ISM G L LA GS LGF+ + G
Sbjct: 57 RVSVPMAVTGLV---MYSRALISMLFLGRLGELALAGGSLALGFANITG 102
>02_05_0294 + 27609656-27611305
Length = 549
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -1
Query: 557 SVPRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 417
++P I TG L RS ISM G L LA GS +GF+ + G
Sbjct: 90 ALPMILTGLL---LYLRSMISMLFLGRLGGLALAGGSLAIGFANITG 133
>01_05_0541 -
23078460-23078597,23078745-23078903,23079264-23079386,
23079839-23080363,23081240-23081421,23084977-23085072,
23085290-23085485
Length = 472
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 445 VDPDTGARGDNDPVDVIEIGERVXSRGDVYPVKILGTLALIDE 573
V P G N+P D ++I S + YP+ + G A+ DE
Sbjct: 95 VCPAASTIGMNEPNDTLQIFSLKLSSNESYPISVYGIFAVRDE 137
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 113 SVAVELIEASYTCRFFNSAQSSCYR-PAN 30
SVA+E++ +S++C FN SS +R P N
Sbjct: 114 SVAMEVVSSSHSCLAFNRTPSSAWRFPGN 142
>04_04_0853 + 28745953-28747635
Length = 560
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -1
Query: 551 PRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 417
P I TG L RS ISM G L LA GS +GF+ + G
Sbjct: 91 PMILTGLL---LYLRSMISMLFLGHLGGLALAGGSLAIGFANITG 132
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 527 SPRLXTRSPISMTSTGSLSPLAPVSG 450
SPR+ + P S +GS+SPL P SG
Sbjct: 320 SPRMTSPGPSSRVHSGSVSPLHPRSG 345
>01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 211 PMHDIPLWADKAQRLVNMVVXVPXWTNAKMEISLGEALNPIKQDVKKGNL 360
P D W +A+RL+ T+ K E LG L K+D +KGNL
Sbjct: 893 PYCDNDFWPGEAERLLEKK---DDDTSQKKETQLGRLLRVAKRDDRKGNL 939
>02_03_0371 - 18267986-18268378
Length = 130
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/67 (35%), Positives = 28/67 (41%)
Frame = +3
Query: 210 AHARHSTMGRQSSTPRQHGSXSTXMDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSS 389
AHARH Q+ R+HG E P G Q AG R PS RE+ P
Sbjct: 28 AHARHRHAAVQARR-REHGVEVNHRGD-EEIRVPEGPNQDVVAGHDARDPSHREE--PHD 83
Query: 390 RLHLELR 410
L L +R
Sbjct: 84 MLQLLVR 90
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 400 RCSRDEGRRCSRTEGCLS 347
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
>11_06_0661 - 26009838-26010950,26011302-26011802
Length = 537
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 331 IKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARG 471
I +D+K N+ N P + ++G L TWE P H D G G
Sbjct: 341 IHRDIKPSNILLDGNWVPR---LTDFG-LALTWEGPGHEDTVVGTYG 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,420,512
Number of Sequences: 37544
Number of extensions: 351409
Number of successful extensions: 881
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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