Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_D19
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical pr...   226   2e-59
Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical pr...   226   2e-59
Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical pr...   226   2e-59
Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical pr...   226   2e-59
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical ...    28   7.3  

>Z68882-7|CAD89727.1|  292|Caenorhabditis elegans Hypothetical
           protein C47E12.4d protein.
          Length = 292

 Score =  226 bits (552), Expect = 2e-59
 Identities = 99/152 (65%), Positives = 122/152 (80%)
 Frame = +1

Query: 130 MYIVQERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVXVPXWTNAKMEIS 309
           +Y   ERGS Y+ DYRV+ K   G +SP HDIPL+A+K +R+ NM+V +P WTNAKME++
Sbjct: 10  VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 69

Query: 310 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 489
             E  +PIKQD KKG  RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 70  TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 129

Query: 490 VIEIGERVXSRGDVYPVKILGTLALIDEGXTE 585
           VIE+G +V  RG V  VK+LGTLALIDEG T+
Sbjct: 130 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETD 161


>Z68882-6|CAA93107.3|  406|Caenorhabditis elegans Hypothetical
           protein C47E12.4c protein.
          Length = 406

 Score =  226 bits (552), Expect = 2e-59
 Identities = 99/152 (65%), Positives = 122/152 (80%)
 Frame = +1

Query: 130 MYIVQERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVXVPXWTNAKMEIS 309
           +Y   ERGS Y+ DYRV+ K   G +SP HDIPL+A+K +R+ NM+V +P WTNAKME++
Sbjct: 124 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 183

Query: 310 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 489
             E  +PIKQD KKG  RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 184 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 243

Query: 490 VIEIGERVXSRGDVYPVKILGTLALIDEGXTE 585
           VIE+G +V  RG V  VK+LGTLALIDEG T+
Sbjct: 244 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETD 275


>Z68882-5|CAD89726.1|  407|Caenorhabditis elegans Hypothetical
           protein C47E12.4b protein.
          Length = 407

 Score =  226 bits (552), Expect = 2e-59
 Identities = 99/152 (65%), Positives = 122/152 (80%)
 Frame = +1

Query: 130 MYIVQERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVXVPXWTNAKMEIS 309
           +Y   ERGS Y+ DYRV+ K   G +SP HDIPL+A+K +R+ NM+V +P WTNAKME++
Sbjct: 125 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 184

Query: 310 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 489
             E  +PIKQD KKG  RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 185 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 244

Query: 490 VIEIGERVXSRGDVYPVKILGTLALIDEGXTE 585
           VIE+G +V  RG V  VK+LGTLALIDEG T+
Sbjct: 245 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETD 276


>Z68882-4|CAD89728.1|  338|Caenorhabditis elegans Hypothetical
           protein C47E12.4a protein.
          Length = 338

 Score =  226 bits (552), Expect = 2e-59
 Identities = 99/152 (65%), Positives = 122/152 (80%)
 Frame = +1

Query: 130 MYIVQERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVXVPXWTNAKMEIS 309
           +Y   ERGS Y+ DYRV+ K   G +SP HDIPL+A+K +R+ NM+V +P WTNAKME++
Sbjct: 56  VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 115

Query: 310 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 489
             E  +PIKQD KKG  RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 116 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 175

Query: 490 VIEIGERVXSRGDVYPVKILGTLALIDEGXTE 585
           VIE+G +V  RG V  VK+LGTLALIDEG T+
Sbjct: 176 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETD 207


>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
           protein C27H6.1 protein.
          Length = 1657

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 373 NVFPHRGYIWNYGALPQTWE-NPNHVDPD 456
           N +P  GYIWNY    Q WE +P++V P+
Sbjct: 401 NAYP--GYIWNYET--QEWEYDPSYVAPE 425


>AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical
           protein F13C5.2 protein.
          Length = 374

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 294 ENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELR 410
           +N D   GGP + + GRK++  S  E    S  LH EL+
Sbjct: 83  KNSDGGAGGPPA-KRGRKKKAKSESEDEAESDHLHDELK 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,879,107
Number of Sequences: 27780
Number of extensions: 283955
Number of successful extensions: 702
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)