Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D18
(856 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 215 6e-56
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 215 6e-56
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 215 6e-56
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 215 6e-56
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 209 3e-54
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 204 2e-52
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 204 2e-52
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 215 bits (525), Expect = 6e-56
Identities = 94/116 (81%), Positives = 103/116 (88%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
KINKKE+VEAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 132
Score = 164 bits (398), Expect = 2e-40
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = +1
Query: 538 YKCXXKAFTKASKKWQDELGRKSIXKDFKXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 717
YK KAFTKASKKW D+LG+KSI DF+ M+RYC V+RVIAH+Q++L+KQRQ AH+ME
Sbjct: 134 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 193
Query: 718 IQLNXGTIXDKVKWATKHLXKPXPVDSVFTQXEMIDCIGVTKGKGY 855
IQLN G+I DKVKWA +HL KP V +VF Q EMIDC+GVTKGKG+
Sbjct: 194 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGF 239
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 215 bits (525), Expect = 6e-56
Identities = 94/116 (81%), Positives = 103/116 (88%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
KINKKE+VEAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
Score = 164 bits (398), Expect = 2e-40
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = +1
Query: 538 YKCXXKAFTKASKKWQDELGRKSIXKDFKXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 717
YK KAFTKASKKW D+LG+KSI DF+ M+RYC V+RVIAH+Q++L+KQRQ AH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 718 IQLNXGTIXDKVKWATKHLXKPXPVDSVFTQXEMIDCIGVTKGKGY 855
IQLN G+I DKVKWA +HL KP V +VF Q EMIDC+GVTKGKG+
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGF 228
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 215 bits (525), Expect = 6e-56
Identities = 94/116 (81%), Positives = 103/116 (88%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
KINKKE+VEAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 215 bits (525), Expect = 6e-56
Identities = 94/116 (81%), Positives = 103/116 (88%)
Frame = +1
Query: 49 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
KINKKE+VEAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
Score = 164 bits (398), Expect = 2e-40
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = +1
Query: 538 YKCXXKAFTKASKKWQDELGRKSIXKDFKXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 717
YK KAFTKASKKW D+LG+KSI DF+ M+RYC V+RVIAH+Q++L+KQRQ AH+ME
Sbjct: 123 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 182
Query: 718 IQLNXGTIXDKVKWATKHLXKPXPVDSVFTQXEMIDCIGVTKGKGY 855
IQLN G+I DKVKWA +HL KP V +VF Q EMIDC+GVTKGKG+
Sbjct: 183 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGF 228
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 209 bits (511), Expect = 3e-54
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNCSPL 408
EAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKNCS +
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNCSSI 112
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 204 bits (497), Expect = 2e-52
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
EAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 164 bits (398), Expect = 2e-40
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = +1
Query: 538 YKCXXKAFTKASKKWQDELGRKSIXKDFKXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 717
YK KAFTKASKKW D+LG+KSI DF+ M+RYC V+RVIAH+Q++L+KQRQ AH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 718 IQLNXGTIXDKVKWATKHLXKPXPVDSVFTQXEMIDCIGVTKGKGY 855
IQLN G+I DKVKWA +HL KP V +VF Q EMIDC+GVTKGKG+
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGF 215
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 204 bits (497), Expect = 2e-52
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +1
Query: 73 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 253 EAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKN 396
EAVT++ETPPM+ VG VGYI TP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Score = 164 bits (398), Expect = 2e-40
Identities = 72/106 (67%), Positives = 87/106 (82%)
Frame = +1
Query: 538 YKCXXKAFTKASKKWQDELGRKSIXKDFKXMIRYCSVVRVIAHTQMKLLKQRQXXAHIME 717
YK KAFTKASKKW D+LG+KSI DF+ M+RYC V+RVIAH+Q++L+KQRQ AH+ME
Sbjct: 110 YKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVME 169
Query: 718 IQLNXGTIXDKVKWATKHLXKPXPVDSVFTQXEMIDCIGVTKGKGY 855
IQLN G+I DKVKWA +HL KP V +VF Q EMIDC+GVTKGKG+
Sbjct: 170 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGF 215
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,865,181
Number of Sequences: 53049
Number of extensions: 705524
Number of successful extensions: 1317
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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