Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D16
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 35 0.071
01_06_0251 - 27885236-27885775,27887383-27887529 33 0.22
05_02_0085 - 6465126-6466049 33 0.28
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 33 0.38
04_04_0675 + 27183826-27184443 32 0.66
11_05_0019 + 18426960-18427292,18428039-18428163,18428722-184288... 31 0.87
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 30 2.7
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 30 2.7
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 30 2.7
01_03_0089 - 12335195-12335614 30 2.7
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 29 3.5
08_02_0610 + 19307537-19308011,19308187-19310846 29 3.5
12_01_0832 - 7718765-7719088 29 4.6
11_06_0610 - 25449085-25453284 29 6.1
08_02_1355 + 26343939-26345054 29 6.1
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 29 6.1
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170... 29 6.1
07_03_1507 - 27228032-27228742 29 6.1
01_05_0571 + 23353319-23354293,23354431-23354574,23354684-23355052 29 6.1
09_04_0303 - 16505782-16506902,16507232-16507292 28 8.1
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 28 8.1
08_02_0159 + 13403198-13403581 28 8.1
07_03_1165 - 24459156-24460139 28 8.1
07_03_0566 - 19572410-19572504,19572590-19572708,19573109-195731... 28 8.1
06_01_0290 + 2122758-2123015,2123128-2123544 28 8.1
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 28 8.1
05_01_0374 + 2924611-2924994 28 8.1
02_05_1032 + 33637108-33638421 28 8.1
02_04_0130 + 20025414-20025531,20026357-20026585,20026909-200270... 28 8.1
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 687 EATSPVLFLQRG-RGAAPRKRXSTRACAPPCPRCSH 583
E++S V+FL G GA P R PPCP CSH
Sbjct: 2 ESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSH 37
>01_06_0251 - 27885236-27885775,27887383-27887529
Length = 228
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 657 RGRGAAPRKRXSTRACAPPCPRCSHCSGGTS--ASAPSGRRGAGSDR 523
RG R R ++R C P R +H GGTS P+GRR A S R
Sbjct: 180 RGGRLLCRGRAASRGCRHPHRREAHGGGGTSPHRQGPAGRRAAASRR 226
>05_02_0085 - 6465126-6466049
Length = 307
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 345 LELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASLATYLDLTVRLLHS 196
L PPR + P +++A +PQ PLP +LDL L+HS
Sbjct: 94 LRSPPRSPSPPTPKPNQVAAVSPQLPLPLPPVSPGRRTLFLDLDETLIHS 143
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 420 RTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGRYLHLVARREPTPKCHHCSGCNED 599
+ VE + L+DWV+ + G+ T TG C+G L + R++P+ GC D
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPS-AMDKIKGCVVD 248
Query: 600 TA 605
+A
Sbjct: 249 SA 250
>04_04_0675 + 27183826-27184443
Length = 205
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 446 DRADRLDGPSPVGGVRQAARPRPEHGTPRLKLPRSNFHRARTRLPPG 306
D D LDGPSP Q+ P P P L S+ + RLP G
Sbjct: 89 DAIDLLDGPSPSASPSQSPSPPPPASPPPLPPAPSSPPPKKRRLPDG 135
>11_05_0019 +
18426960-18427292,18428039-18428163,18428722-18428874,
18428959-18429145
Length = 265
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 657 RGRGAAPRKRXSTRACAPPCPRCSHCSGGTSASA 556
R RGA PR+ + RA PP SGG +A+A
Sbjct: 35 RWRGAVPRRARARRAVVPPRASLVDSSGGAAAAA 68
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 506 EHLRRSEGETSSVAIHPVREDRADRLDGPSPVGGVRQAARPR-PEHGTPRLKLPRSNFHR 330
+H RR+ +TSS P + ++L+ G + PR P H T SN H
Sbjct: 359 DHFRRNNTDTSSSVASPATDLFLEKLEDDDDGGWPWERETPRPPPHHTSNAACSNSNDHG 418
Query: 329 ART 321
R+
Sbjct: 419 GRS 421
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = -2
Query: 375 ARHAEIEASA----LELPPRQD---AAPPWSGDRIATRNPQRAPPLPGPREASLA 232
A HA +SA L+ P R+ A PP G R+A R P PP P P AS A
Sbjct: 44 ALHASSSSSAADALLDAPTRRQPPVAPPPSLGLRLAARRPNLPPP-PAPAPASPA 97
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -3
Query: 491 SEGETSSVAIHPVREDRADRLDGPSPVGGVR--QAARPRPEHGTP 363
+E +SS+ +HP A ++ S GG++ ++ PRPE TP
Sbjct: 90 AESSSSSLPLHPSAAAAARKVIPASAAGGLKRSKSVAPRPEETTP 134
>01_03_0089 - 12335195-12335614
Length = 139
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 639 PRKRXSTRACAPPCPRCSHCSGGTSASAPSG-RRGAGSDRNS 517
P R S R+ PP P + +G ++A+ G R+G G RNS
Sbjct: 60 PLHRLSPRSGTPPTPSATSTAGPSAAALSRGQRQGEGWKRNS 101
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 587 LQRGHGGAHA-RVLXRFRGAAPR-PRCKNRTGLVASDRRGYXARQRR 721
L+RG GGA A R R R APR P + + + A +RR RQRR
Sbjct: 292 LERGEGGAGADRRDARGRRRAPRQPGVRGQDRVDAGERRPERVRQRR 338
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 660 QRGRGAAPRKRXSTRACAPPCPRCSHCSGGTSASAPSGRRG 538
+RG G P + RA AP C + G +A+A SGR G
Sbjct: 912 RRGAGRPPLRAPQARAAAPAC-----AARGAAAAATSGRTG 947
>12_01_0832 - 7718765-7719088
Length = 107
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 628 GQYASVCSAVSSLQPLQWWHFGVGSLRATRCR*RPKQPCPVST 500
G+ S+ +L + +WH+G G A R +P PC + T
Sbjct: 27 GKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGT 69
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -2
Query: 690 SEATSPVLFLQRGRGAAPRKRXSTRACAPPCPRCSHCSGGTSAS-APSGRRGAGSDRNSR 514
SEA+SP G +P K +PP P SH S T PS + + + S
Sbjct: 722 SEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSP 781
Query: 513 VP*AP 499
P +P
Sbjct: 782 PPHSP 786
>08_02_1355 + 26343939-26345054
Length = 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 545 DEVQVATETAVSREHLRRSEGETSSVAIHPVRED 444
D+ Q + AV EHL GE +A+HP ED
Sbjct: 278 DDDQWRPKHAVKVEHLAHGGGEVRFLAMHPEEED 311
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 247 PGTWKRRRSLRITRGDAISAPGG 315
P W+RRR + RG A+S GG
Sbjct: 24 PQRWRRRRQRGVERGGAVSGGGG 46
>08_01_0213 -
1703682-1703696,1703824-1703919,1704033-1704104,
1704372-1704444,1704508-1704710,1705058-1706330,
1706800-1706868,1706940-1707088,1707275-1707487,
1708385-1708669
Length = 815
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 307 PGGSRVLARWKFERGSFNLGVPCS-----GRGLAAWRTPPTGDG 423
P G R L W RG+ PC+ G G AA TPP G
Sbjct: 2 PSGGRRLPPWTSPRGAAPRWSPCTPAGADGSGRAAHATPPASGG 45
>07_03_1507 - 27228032-27228742
Length = 236
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 651 RGAAPRKRXSTRACAPPCPRCSHCSGGTSASAPSG 547
R R+R S R CA P R + G + PSG
Sbjct: 147 RAVGRRRRPSGRGCAAPVGRAGEAAFGAPSRLPSG 181
>01_05_0571 + 23353319-23354293,23354431-23354574,23354684-23355052
Length = 495
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 612 CAP-PCP-RCSHCSGGTSASAPSGRRGAGSDRNSRVP 508
C P P P SH S +SA G G G DR SR+P
Sbjct: 11 CLPTPAPFSTSHGSLSSSAGGGGGSGGGGDDRISRLP 47
>09_04_0303 - 16505782-16506902,16507232-16507292
Length = 393
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 362 RLKLPRSNFHRARTRLPPGAEIASPRVIRSE 270
RL++ S H A + LPP A A+ ++RSE
Sbjct: 95 RLQVAPSPAHAAASSLPPSAAAAATAILRSE 125
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 447 LSDWVNRDRGRLTFRATQVLTGHGCFGR--YLHLVARREPTPKCHHCSGCN 593
LS+W G T+ + +G + Y H P P+C HCS CN
Sbjct: 131 LSEWPGGQHGSTGLPLTKDVLVNGVLVKVKYCHTCMLYRP-PRCSHCSICN 180
>08_02_0159 + 13403198-13403581
Length = 127
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 576 GGTSASAPSGRRGAGSDRNSRVP 508
GG S + GRRG G D +R P
Sbjct: 21 GGESPAVGDGRRGGGDDNGARAP 43
>07_03_1165 - 24459156-24460139
Length = 327
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 378 RARHAEIEASALELPPRQDAAPPWSGDRIATRNPQRA 268
R HAE E + LPP Q AAP R+ TR R+
Sbjct: 133 RVHHAENEKEPMSLPP-QVAAPVHPQARLPTRGASRS 168
>07_03_0566 -
19572410-19572504,19572590-19572708,19573109-19573161,
19573251-19573306,19574297-19574340,19576767-19576816,
19577393-19577398,19577675-19578103
Length = 283
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 654 GRGAAPRKRXSTRACAPPCPRCSHCSGGTSASAPSGRRGAG 532
G GAA +R R+ AP + +G +S+S+ S RRG G
Sbjct: 54 GGGAAAARRSKGRSSAPVAIPAA-AAGSSSSSSLSSRRGGG 93
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 582 CSGGTSASAPSGRRGAGSDRNSRVP*APASLG 487
CS G+ S+ SG+RG+GS V A +G
Sbjct: 25 CSPGSPVSSGSGKRGSGSGSGDEVDDAGCDVG 56
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 321 AAPPWSGDRIATRNPQRAPPLPGPREAS 238
AAP GD +A RAPP P P A+
Sbjct: 18 AAPKPPGDAVAAEGEARAPPRPPPAVAA 45
>05_01_0374 + 2924611-2924994
Length = 127
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 618 RACAPPCPRCSHCSGGTSASAPSGRRGAGSD 526
RA APP P H T+ +A G GAG +
Sbjct: 89 RAAAPPPPNSDHFFWTTAGAASRGGAGAGGE 119
>02_05_1032 + 33637108-33638421
Length = 437
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 500 GAHGTRLFRSLPAPRRPEG--ADAEVPPLQWLQRGHGGAHARVLXRFRG 640
G H R R+ APRRP G A A + L G G H + R RG
Sbjct: 72 GLHWERQIRASAAPRRPPGSAAGAGMSVLVTGAAGFVGTHCSLALRKRG 120
>02_04_0130 +
20025414-20025531,20026357-20026585,20026909-20027032,
20027441-20027497,20027613-20027804,20027882-20027959,
20028437-20028619,20028715-20028795,20029196-20029228,
20029448-20029513,20029591-20029683,20030106-20030231,
20030395-20030508,20030973-20031068,20031159-20031256,
20031416-20031831,20032025-20032473,20032810-20032905
Length = 882
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -3
Query: 554 PPGDEVQVATETAVSREHLRRSEGETSSV--AIHPVREDRADRLDGPS----PVGGV 402
PP + + E+ R +R++EG T S+ ++ E + LDGP P+GG+
Sbjct: 33 PPPPSAKGSQESRTPRRRVRKTEGATKSLEDSVKRKMEQFYEGLDGPPLRVLPIGGL 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,868,890
Number of Sequences: 37544
Number of extensions: 534165
Number of successful extensions: 2777
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -