Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D13
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0600 + 19866757-19867218,19867920-19868429 33 0.38
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 33 0.38
08_01_0585 + 5187545-5187961 32 0.50
04_03_0884 + 20543084-20543638 31 0.88
01_06_1377 + 36764461-36765339 31 0.88
09_04_0379 - 17094540-17094868,17095354-17095717 31 1.5
04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048 31 1.5
04_03_1017 + 21747044-21748051 31 1.5
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 30 2.0
09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185 30 2.0
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 30 2.7
04_04_0146 + 23106325-23108154 30 2.7
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 30 2.7
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538... 29 3.5
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 29 3.5
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 29 3.5
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 29 3.5
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 29 4.7
03_05_0738 + 27267514-27268279,27268373-27268395 29 4.7
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 4.7
11_06_0610 - 25449085-25453284 29 6.2
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 29 6.2
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 29 6.2
09_03_0006 + 11426346-11426420,11426733-11427452 29 6.2
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 29 6.2
07_03_0565 - 19561078-19561425,19562253-19563746 29 6.2
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421... 29 6.2
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 6.2
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 29 6.2
03_05_0750 - 27383848-27383940,27384016-27384137,27384525-273845... 29 6.2
03_05_0505 + 24991699-24991921,24992100-24992665 29 6.2
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 29 6.2
09_02_0622 - 11310941-11311472,11312776-11312813,11312875-113129... 28 8.2
08_02_0178 - 13853847-13854416 28 8.2
07_03_0676 + 20618677-20618840,20618938-20619502 28 8.2
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 8.2
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 28 8.2
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 28 8.2
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = -1
Query: 438 KEVPAKTPMAGQHXRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRL-QHGPP 262
++ P T G H P + S A P + + + +Q P Q GPP
Sbjct: 2 QQPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
Query: 261 RVEPPRSNYTFXGAPFPPRAEVATPP 184
PP+ G P PP + A PP
Sbjct: 60 HAPPPQQPPAMWGQPPPPPPQYAPPP 85
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 315 AGRRVRQAARPRLQHGPP-RVEPPRSNYTFXGAPFPPRAEVA 193
AG+ R RP+ QH PP R PPR ++ + P A V+
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAAAAVS 124
>08_01_0585 + 5187545-5187961
Length = 138
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +2
Query: 11 PYGATP*PARTSRRCDVRSARSRSGRSEDTAPSPS---RRRACSPGRHPGTWRRRR 169
P P P +SRR + R + E P P+ RRR C G PG R+R
Sbjct: 67 PSSRRPDPTLSSRRLAAKRRRPHAAIEERRRPRPAAAERRRPCVAGGRPGKKERKR 122
>04_03_0884 + 20543084-20543638
Length = 184
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 270 GPPRVEPPRSNYTFXGAPFPPRAEVAT---PPVIGSERLRLQVPGWRPGEQ 127
GP + PPRS + AP PP+ ++A S+R + + GW PGE+
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMAMMMHMTFFWSDRAVVLIRGW-PGER 59
>01_06_1377 + 36764461-36765339
Length = 292
Score = 31.5 bits (68), Expect = 0.88
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 390 PEGEASAVAAHPVREDRTDRLDGTEAGR-RVRQAARPRLQHGPPRVEPPRSNYTFXGAPF 214
P+ ASA+ P+ R G G+ R+R A R R P PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 213 PPRAEVA-TPPVIGSER 166
PP A A PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 404 NXCVSRKVRHPRSRPTQSARTGRTASTVRRPADG 303
N + R++RH +PT AR G + +PA G
Sbjct: 176 NRAIPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>04_04_0858 + 28800691-28801155,28801293-28801515,28802555-28803048
Length = 393
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 50 RCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 172
R D SA + SGR + ++P+ S RR GRH G R+S
Sbjct: 111 RVDSCSAAAVSGRDDGSSPAMSPRRRSWEGRHAGGVAGRQS 151
>04_03_1017 + 21747044-21748051
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 65 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 178
S R+ + + T SP RRRA SP P T RR + P
Sbjct: 168 SRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASP 205
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 65 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 178
S R S D +PS RRA SP P T RR + P
Sbjct: 196 STPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 233
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLP 178
R S D +PS RRA SP P T RR + P
Sbjct: 186 RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 219
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 98 TAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGG 214
TAP PSR R SPGRH S G+ A+ G
Sbjct: 237 TAPPPSRNRKKSPGRHSNGSGSSSSSGGNSGLRAGAIAG 275
>09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185
Length = 248
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 25 ALTRENVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWR 192
AL VA+L P+ VR + G V + L AP L AL+ DY+W+
Sbjct: 2 ALPTATVASL--PELRALVREVVGECRVQVRSVAALRDAPEMYLALSALSVDYQWQ 55
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 29.9 bits (64), Expect = 2.7
Identities = 32/115 (27%), Positives = 49/115 (42%)
Frame = -1
Query: 414 MAGQHXRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQHGPPRVEPPRSNY 235
+AG H GEA+A AA + D DG EA +R RP+L+ PP
Sbjct: 156 LAGAHD-DVGGEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGR 209
Query: 234 TFXGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDR 70
+ + P +AE +P + G +R P WR ++ R++ P +R
Sbjct: 210 SRGRSRHPRKAESTSPSISGGDRGSRSGP-WRQLKRWRKVASRAVQRKSLPAGER 263
>04_04_0146 + 23106325-23108154
Length = 609
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 309 RRVRQAARPRLQHGPPRVEPPRSNYTFXGAPFPP-RAEVATPPVIGSERLRLQVP 148
R +R RPR P PP S + AP PP +A A P ++ + + L +P
Sbjct: 3 RALRLRHRPRRPPPVPAQAPPPSPRPWYAAPPPPPQAAAADPLLVAASEVALALP 57
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 35 ARTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPG 151
AR++R + A+ + AP P+ R A P RH G
Sbjct: 31 ARSARHHHAKHAKRNAAHPPSQAPGPAARHAPGPARHHG 69
>10_07_0109 +
12952293-12952952,12953049-12953402,12953494-12953816,
12953939-12954062
Length = 486
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 74 IARCGRRSAATFSRVRAWHH 15
IA C S A SR+RAWHH
Sbjct: 311 IAGCVSGSEALISRIRAWHH 330
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 74 IARCGRRSAATFSRVRAWHH 15
IA C S A SR+RAWHH
Sbjct: 297 IAGCVSGSEALISRIRAWHH 316
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 89 SEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGG 214
S D P SPG P WRRRR + G A S GG
Sbjct: 6 SSDLPPRAGAGAGASPG-WPQRWRRRRQRGVERGGAVSGGGG 46
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1
Query: 306 RVRQAARPRLQHGPPRVEPPRSNYTFXGAPFPPRAEVATPPVI 178
R A P PPR P GAP PPR A P++
Sbjct: 16 RTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLV 58
>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 300 RQAARPRLQHGP-PRVEPPRSNYTFXGAPFPPRAEVATPPVIGSERLRLQVPGW-RPG 133
RQA R L P P +P S+ GA PP ++ AT +E + + GW RPG
Sbjct: 160 RQALRDALSLDPSPPAKPLDSS---SGATAPPSSQAATSYASSAENIARLLEGWMRPG 214
>03_05_0738 + 27267514-27268279,27268373-27268395
Length = 262
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 74 SRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSAL 208
+R ++ P P R P +P W R LP GG A SA+
Sbjct: 40 TRQRHGQEPKPKPKPRARAKP--NPYDWAPPRVLPARGGAAASAV 82
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 65 SARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 169
+ + R + +PSPS RR+ S R P +RR R
Sbjct: 505 TVEEKDARGKSRSPSPSARRSKSRSRSPIKYRRSR 539
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 5/95 (5%)
Frame = -1
Query: 453 PSGYXKEVPAKTPMAGQHXRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQ 274
P G+ P TP + PE EAS+ P E T + P
Sbjct: 699 PEGHMPSPPKSTPPVEKSPPTPESEASS-PPPPAPEGHTPSPPKSSPPEEKSPPIPPTSH 757
Query: 273 HGPPRVE-----PPRSNYTFXGAPFPPRAEVATPP 184
PP E PP+S+ +P PP + +PP
Sbjct: 758 TSPPTPEEYTPSPPKSSPPEEKSP-PPHSPEKSPP 791
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Frame = -1
Query: 447 GYXKEVPAKTPMAGQHXRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQA--ARPRLQ 274
G K+ P + M + A AV HP + R G + + R R++
Sbjct: 399 GCVKDYPMQLRMQALEMIETVVAAVAVFPHPPSQ-RAAAAAGASRVPAIASSPRGRRRIE 457
Query: 273 HGPPRVEPPR--SNYTFXGAPFPPRAEVATPPV 181
R+EPPR S+ F +P PP +PP+
Sbjct: 458 GSGRRIEPPRPPSHRGFRPSPPPPGVAYNSPPL 490
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = -1
Query: 249 PRSNYTFXGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDR 70
P++ T A PP A +AT P IG + PG PG RL GA++ R + R
Sbjct: 395 PKAETTAGTAAAPPVAAIATSPAIGWVAPQ---PGAHPG----RLLAAGALAG-RARQAR 446
Query: 69 ALRTSQRRDVLAG 31
+ S+R V AG
Sbjct: 447 GVVRSRRVAVFAG 459
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2
Query: 20 ATP*PARTSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR---SLPITGG 190
A P + + R C +R S P+ RR C+ RH RRR SL +TG
Sbjct: 37 AAPPASSSQRHCAIRPVPPSSFSRRRRRRPPALRRCCAAWRHRTRKRRRTRLCSLLVTGV 96
Query: 191 V 193
V
Sbjct: 97 V 97
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -1
Query: 267 PPRVEP-PRSNYTFXGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSS 91
PP+ +P P+ AP PP + + P G + ++Q+P R G
Sbjct: 69 PPQPQPHPQLQPPPPPAPLPPPSRRSAPRAQGVDPTKIQLPCARCKAILNVPHGLARFRC 128
Query: 90 DRPDRDRALRTSQRRDVL--AGQGVAP 16
+ D D A+ S+ R+ L AG G AP
Sbjct: 129 PQCDVDLAVDLSKLRNFLATAGPGFAP 155
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 110 PSRRRACSPGRHPGTWRRRR-SLPITGGVATSALGGKGAPXKV*FERGGSTLGGPCWR 280
P RR +P H T +RRR S+ + + A G+G F R +T GG W+
Sbjct: 385 PGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGV--FGRHATTTGGARWK 440
>07_01_0568 -
4216898-4216911,4216997-4217024,4217265-4217335,
4218026-4218140,4218245-4218314,4218552-4218646,
4219320-4219379,4219476-4219547,4219676-4219819
Length = 222
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 258 VEPPRSNYTFXGAPFPPRAEVATPP 184
+ PP + TF GAP PP E PP
Sbjct: 2 ITPPVAGDTFAGAPPPPSQEEDAPP 26
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 319 RTVEAVRPVLADWVGRDRGCLTFRLTXMLTGHGCFGRYLFXIAGREPTA 465
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 80 SGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKGAP 226
S + P P + AC+ H W SLP G AT + G+ AP
Sbjct: 336 SEEDKQNMPLPVQGPACNSSGHLAGWHTFNSLPFAGKTAT--VVGEAAP 382
>03_05_0750 -
27383848-27383940,27384016-27384137,27384525-27384578,
27384682-27384783,27386838-27387087
Length = 206
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 44 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTW 157
SRRCD SA G + S +RRRAC R W
Sbjct: 31 SRRCDAVSAVG--GANSGNGWSKARRRACGSSRERDGW 66
>03_05_0505 + 24991699-24991921,24992100-24992665
Length = 262
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 20 ATP*PARTSRRCDV--RSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGV 193
A P P T+ C + G ++ AP+P RRR C PG G R + V
Sbjct: 59 AGPRPPATAHACALLRHGGGDGDGWADPAAPNP-RRRICPPGDQIGQGRGCSGRAVVAAV 117
Query: 194 ATS 202
A S
Sbjct: 118 AGS 120
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 288 RPRLQHGPPRVEPPRSNYTFXGAPFPPRAEVATPPVIGS 172
R RL+ G R+ P R + + P PP ATPP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>09_02_0622 -
11310941-11311472,11312776-11312813,11312875-11312926,
11313891-11314270
Length = 333
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 168 RLRLQVPG--WRPGEQARRLEGDGAVSSDRPDRDR 70
R R PG WR E A RL+G G S+D R R
Sbjct: 21 RWRRGGPGLAWRSAEAAGRLDGGGGASADATGRRR 55
>08_02_0178 - 13853847-13854416
Length = 189
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -1
Query: 318 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFXGAPFPPRAEVATPPVIGSERLRLQVP 148
+A RR + P LQ+ V PP + PFPP+A A G + QVP
Sbjct: 124 KAARRTKATTAPILQYSVGYV-PPHVHPQVMTRPFPPQAAQAPVYFAGQHQPPGQVP 179
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 28.3 bits (60), Expect = 8.2
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Frame = -1
Query: 414 MAGQHXRQPEGEASAVAAHPVREDR-TDRLDGTEAGRR---VRQAARPRLQHGPPRVEPP 247
M G+ E + A AA R +R R++G A R A + P VE
Sbjct: 64 MGGRKDAGDEEDGEAGAATAFRRNRGAARVEGGVAEPREVVATSAGARETRQWRPEVEQW 123
Query: 246 RSNYTFXG---AP-FPPRAEVATP--PVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDR 85
R + F G +P PR T V R + P P + RRLE GA +
Sbjct: 124 RQRHCFAGEDASPVLSPRNGGLTEGEEVAARPREKTARPDGAPARRERRLEAAGAEEREG 183
Query: 84 PDRDRALRTSQRRDVLAGQG 25
R+RA R AG+G
Sbjct: 184 RRRERA-SGGHRAKRRAGRG 202
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 297 QAARPRLQHGP--PRVEPPRSNYTFXGAPFPPRAEVATPP 184
Q P L H P P + P AP PPRA TPP
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPP 200
>03_05_0936 -
28955486-28955683,28956320-28956424,28956550-28956693,
28957078-28957356,28957480-28957587,28958288-28958567,
28958724-28960029,28961301-28962342
Length = 1153
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 3 LGSRMVPRPDPRERRGAATSAARDRGQG 86
L +V PR RRGA + RDRG G
Sbjct: 127 LAELLVSEEVPRHRRGAVVAEKRDRGVG 154
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 65 SARSRSGRSE---DTAPSPSRRRACSPGRHPGTWRRRRS 172
S RSR S+ D+A SPS A SP R P R RS
Sbjct: 21 SRRSRDASSDPDPDSASSPSPSSASSPSRSPDRRSRSRS 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,395,358
Number of Sequences: 37544
Number of extensions: 346576
Number of successful extensions: 2110
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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