Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_D09
(895 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 8e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 2e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 27 0.17
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 27 0.17
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.40
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.40
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 26 0.40
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.93
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 5.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.6 bits (113), Expect = 4e-08
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = +2
Query: 98 IASAAECENATSLSPMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 256
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 257 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
+ L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 28.7 bits (61), Expect = 0.076
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
TT++ A + G V W + + + +P D QTC FGS
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 116 CENATSLSPMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 280
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 382
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 45.2 bits (102), Expect = 8e-07
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 122 NATSLSPMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 289
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 290 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 388
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 33.9 bits (74), Expect = 0.002
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
R+ +G V + RL I M L+N+P D Q C FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.2 bits (102), Expect = 8e-07
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Frame = +2
Query: 89 TCAIASAAECENATSLSPMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 247
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 248 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 394
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
Score = 25.8 bits (54), Expect = 0.53
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
T ++ A + + G V W + + ++ +P D QTC FGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Frame = +2
Query: 116 CENATSLSPMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 274
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
T + A ++ G V W + + ++ +P D QTC FGS
Sbjct: 124 TLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V+++GS ++ + M + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 21.8 bits (44), Expect = 8.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V+++GS ++ + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V+++GS ++ + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 21.8 bits (44), Expect = 8.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V+++GS ++ + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V+++GS ++ + M + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT ++ V++NGS ++ + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT + V++NGS ++ + + + +P D Q C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT + V++NGS ++ + + + +P D Q C FGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.3 bits (95), Expect = 6e-06
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +2
Query: 143 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 301
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 302 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
L WN E+G L V SE +W PD+VL N A
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 28.3 bits (60), Expect = 0.10
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
T ++ A + G VSW + + ++ +P D Q+C FGS
Sbjct: 133 TLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 307
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 308 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 28.3 bits (60), Expect = 0.10
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
T ++ A V +G V W + S+ ++ +P D+QTC GS
Sbjct: 128 TLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 307
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 308 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 411 TTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
T + A + + G V W + + ++ +P D QTC FGS
Sbjct: 128 TLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 367
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 368 PDVVLLNAAATTAGDYALR 424
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
Score = 29.1 bits (62), Expect = 0.057
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 441 NGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
NG V W+ + ++ + +P D QTC FGS
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGS 171
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 197 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 373
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 374 VVLLNAA 394
+L N A
Sbjct: 92 TILYNNA 98
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 432 VSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
VS+ G V W+ + + ++ +P D Q C + S
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 39.1 bits (87), Expect = 5e-05
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +2
Query: 95 AIASAAECENATSLSPMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 259
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 260 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 408 GTTLSAARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
GT + V NNG+ ++ + + + +P D Q C FGS
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.5 bits (83), Expect = 2e-04
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +2
Query: 119 ENATSLSPMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 286
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 287 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT 403
W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT 138
Score = 29.5 bits (63), Expect = 0.043
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 432 VSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGSRMH 557
V ++GSVS + + + +WP D C FGS +H
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVH 192
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 301
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 302 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 388
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
R+ NGSV + R+ ++ M L +P D Q C+ S
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
R+S +G + + RL I M L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 32.7 bits (71), Expect = 0.005
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +2
Query: 131 SLSPMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 295
+++ ++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 296 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 388
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
R+ NGSV + R+ ++ M L +P D Q C+ S
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCT 533
R+S +GSV++ R + M L +P D Q CT
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTC 530
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTC 530
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTC 530
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.0 bits (52), Expect = 0.93
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 456 WIKRLDISTPISMXLDNWPNDMQTCTFXFGSRMHXT 563
++ +L + +M +++P+D Q C+ S H T
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTT 157
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 423 AARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
A R+ NG+V+++ R + L+ +P D C+F S
Sbjct: 165 ALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 423 AARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
A R+ NG+V+++ R + L+ +P D C+F S
Sbjct: 165 ALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 423 AARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
A R+ NG+V+++ R + L+ +P D C+F S
Sbjct: 216 ALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 423 AARVSNNGSVSWIKRLDISTPISMXLDNWPNDMQTCTFXFGS 548
A R+ NG+V+++ R + L+ +P D C+F S
Sbjct: 165 ALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 197 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 358
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 359 LWRPDVVLLNA 391
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 340 PSAAAPLPCVPTQS 299
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,904
Number of Sequences: 438
Number of extensions: 3617
Number of successful extensions: 88
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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