Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C23
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 71 1e-12
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 71 1e-12
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 149 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 208
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
K AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 149 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 208
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
K AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 35.5 bits (78), Expect = 0.049
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQM 677
DF K+ +YCS +RVIAHTQM
Sbjct: 149 DFAKLKKYCSSIRVIAHTQM 168
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRK 604
K AFTK +KKW DE G+K
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKK 144
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 149 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 208
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
K AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 35.5 bits (78), Expect = 0.049
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQM 677
DF K+ +YCS +RVIAHTQM
Sbjct: 149 DFAKLKKYCSSIRVIAHTQM 168
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRK 604
K AFTK +KKW DE G+K
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKK 144
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 397
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 149 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 208
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 542 KCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
K AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 51 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 110
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 539 YKCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
Y+ AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +3
Query: 618 DFXKMIRYCSVVRVIAHTQMXLLNSDKXRLTLWKIQLNGGTIEDKVKWAXKHLEXLSLVD 797
DF K+ +YCS +RVIAHTQM +L + + L +IQ+NGGTIE KV WA +HLE VD
Sbjct: 51 DFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD 110
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 539 YKCXXXAFTKASKKWXDELGRKSXXKRFQXDDPLL*CCKSHCPHSNEXVKQRQXKAHIME 718
Y+ AFTK +KKW DE G+K F + + +++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,295,161
Number of Sequences: 27780
Number of extensions: 362810
Number of successful extensions: 781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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