Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C21
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 306 1e-83
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 306 1e-83
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 306 1e-83
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 306 1e-83
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 241 3e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 241 3e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 112 3e-25
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 112 3e-25
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 306 bits (752), Expect = 1e-83
Identities = 143/254 (56%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQL 589
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWAXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXK 766
NGGTIE KV WA EHLEK V ++ + + R K + P K
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRK 243
Query: 767 XHKGLRXVACLGXW 808
HKGLR VAC+G W
Sbjct: 244 THKGLRKVACIGAW 257
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 306 bits (752), Expect = 1e-83
Identities = 143/254 (56%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQL 589
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWAXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXK 766
NGGTIE KV WA EHLEK V ++ + + R K + P K
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRK 243
Query: 767 XHKGLRXVACLGXW 808
HKGLR VAC+G W
Sbjct: 244 THKGLRKVACIGAW 257
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 306 bits (752), Expect = 1e-83
Identities = 143/254 (56%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQL 589
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWAXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXK 766
NGGTIE KV WA EHLEK V ++ + + R K + P K
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRK 243
Query: 767 XHKGLRXVACLGXW 808
HKGLR VAC+G W
Sbjct: 244 THKGLRKVACIGAW 257
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 306 bits (752), Expect = 1e-83
Identities = 143/254 (56%), Positives = 175/254 (68%), Gaps = 1/254 (0%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQL 589
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 590 NGGTIEDKVKWAXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXK 766
NGGTIE KV WA EHLEK V ++ + + R K + P K
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRK 243
Query: 767 XHKGLRXVACLGXW 808
HKGLR VAC+G W
Sbjct: 244 THKGLRKVACIGAW 257
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQM 538
WQDE G+K I DF K+ +YC +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 758 PXKXHKGLRXVACLGXW 808
P K HKGLR VAC+G W
Sbjct: 193 PRKTHKGLRKVACIGAW 209
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (591), Expect = 3e-64
Identities = 105/163 (64%), Positives = 125/163 (76%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 229
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 230 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 409
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 410 XXXXXXXXXXXWQDELGRKSIXKDFKKMIRYCXVVRVIAHTQM 538
WQDE G+K I DF K+ +YC +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 758 PXKXHKGLRXVACLGXW 808
P K HKGLR VAC+G W
Sbjct: 193 PRKTHKGLRKVACIGAW 209
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 112 bits (270), Expect = 3e-25
Identities = 58/123 (47%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +2
Query: 443 WQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQLNGGTIEDKVKW 622
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 623 AXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXKXHKGLRXVACL 799
A EHLEK V ++ + + R K + P K HKGLR VAC+
Sbjct: 99 AREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Query: 800 GXW 808
G W
Sbjct: 157 GAW 159
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 112 bits (270), Expect = 3e-25
Identities = 58/123 (47%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +2
Query: 443 WQDELGRKSIXKDFKKMIRYCXVVRVIAHTQMXLLKQRQXXAHIMEIQLNGGTIEDKVKW 622
WQDE G+K I DF K+ +YC +RVIAHTQM +L++RQ AH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 623 AXEHLEKPXPVRFCVCPX*ND*LHWVS-PRAKDTKVSLLXGTQRXYPXKXHKGLRXVACL 799
A EHLEK V ++ + + R K + P K HKGLR VAC+
Sbjct: 99 AREHLEKQVQVDTVFAQ--DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Query: 800 GXW 808
G W
Sbjct: 157 GAW 159
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 50 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 136
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 275 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 403
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 256 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 423
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,125,605
Number of Sequences: 27780
Number of extensions: 368796
Number of successful extensions: 846
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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