Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_C19
         (927 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075479-1|AAL68291.1|  290|Drosophila melanogaster RE37074p pro...    49   8e-06
AF085601-1|AAC97112.1|  290|Drosophila melanogaster inorganic py...    49   8e-06
AF085600-1|AAC97111.1|  290|Drosophila melanogaster inorganic py...    49   8e-06
AE013599-3900|AAF47227.2|  338|Drosophila melanogaster CG4634-PA...    49   8e-06

>AY075479-1|AAL68291.1|  290|Drosophila melanogaster RE37074p
           protein.
          Length = 290

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%)
 Frame = +1

Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
           I QD+ KG +RFV + F H+GY+WN     +T  E P         +G   + +  I IG
Sbjct: 71  IKQDIKKGKLRFVANCFPHKGYIWNYGALPQT-WENPDHIEPSTGCKG-DNDPIDVIEIG 128

Query: 532 ERVASXGDVYPVK 570
            RVA  GDV  VK
Sbjct: 129 YRVAKRGDVLKVK 141


>AF085601-1|AAC97112.1|  290|Drosophila melanogaster inorganic
           pyrophosphatase NURF-38 protein.
          Length = 290

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%)
 Frame = +1

Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
           I QD+ KG +RFV + F H+GY+WN     +T  E P         +G   + +  I IG
Sbjct: 71  IKQDIKKGKLRFVANCFPHKGYIWNYGALPQT-WENPDHIEPSTGCKG-DNDPIDVIEIG 128

Query: 532 ERVASXGDVYPVK 570
            RVA  GDV  VK
Sbjct: 129 YRVAKRGDVLKVK 141


>AF085600-1|AAC97111.1|  290|Drosophila melanogaster inorganic
           pyrophosphatase NURF-38 protein.
          Length = 290

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%)
 Frame = +1

Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
           I QD+ KG +RFV + F H+GY+WN     +T  E P         +G   + +  I IG
Sbjct: 71  IKQDIKKGKLRFVANCFPHKGYIWNYGALPQT-WENPDHIEPSTGCKG-DNDPIDVIEIG 128

Query: 532 ERVASXGDVYPVK 570
            RVA  GDV  VK
Sbjct: 129 YRVAKRGDVLKVK 141


>AE013599-3900|AAF47227.2|  338|Drosophila melanogaster CG4634-PA
           protein.
          Length = 338

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%)
 Frame = +1

Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
           I QD+ KG +RFV + F H+GY+WN     +T  E P         +G   + +  I IG
Sbjct: 119 IKQDIKKGKLRFVANCFPHKGYIWNYGALPQT-WENPDHIEPSTGCKG-DNDPIDVIEIG 176

Query: 532 ERVASXGDVYPVK 570
            RVA  GDV  VK
Sbjct: 177 YRVAKRGDVLKVK 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,723,627
Number of Sequences: 53049
Number of extensions: 391759
Number of successful extensions: 365
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)