Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C19
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
I QD KG RFV++IF H+GY+WN +T E P A+G + + I +G
Sbjct: 77 IKQDEKKGVARFVHNIFPHKGYIWNYGALPQT-WEDPNHVVPDTGAKG-DNDPIDVIEVG 134
Query: 532 ERVASXGDVYPVK 570
+VA G V VK
Sbjct: 135 SKVAGRGAVLQVK 147
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = +2
Query: 428 YGALPAHLGRXLNHXXP*XGREGRQRTXXXXXXXXXXXXXXXTYTP*KXLGTLALIDXXH 607
YGALP NH P G +G K LGTLALID
Sbjct: 102 YGALP-QTWEDPNHVVPDTGAKG-DNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGE 159
Query: 608 XXWXLIPID 634
W L+ ID
Sbjct: 160 TDWKLVAID 168
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
I QD KG RFV++IF H+GY+WN +T E P A+G + + I +G
Sbjct: 191 IKQDEKKGVARFVHNIFPHKGYIWNYGALPQT-WEDPNHVVPDTGAKG-DNDPIDVIEVG 248
Query: 532 ERVASXGDVYPVK 570
+VA G V VK
Sbjct: 249 SKVAGRGAVLQVK 261
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = +2
Query: 428 YGALPAHLGRXLNHXXP*XGREGRQRTXXXXXXXXXXXXXXXTYTP*KXLGTLALIDXXH 607
YGALP NH P G +G K LGTLALID
Sbjct: 216 YGALP-QTWEDPNHVVPDTGAKG-DNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGE 273
Query: 608 XXWXLIPID 634
W L+ ID
Sbjct: 274 TDWKLVAID 282
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
I QD KG RFV++IF H+GY+WN +T E P A+G + + I +G
Sbjct: 192 IKQDEKKGVARFVHNIFPHKGYIWNYGALPQT-WEDPNHVVPDTGAKG-DNDPIDVIEVG 249
Query: 532 ERVASXGDVYPVK 570
+VA G V VK
Sbjct: 250 SKVAGRGAVLQVK 262
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = +2
Query: 428 YGALPAHLGRXLNHXXP*XGREGRQRTXXXXXXXXXXXXXXXTYTP*KXLGTLALIDXXH 607
YGALP NH P G +G K LGTLALID
Sbjct: 217 YGALP-QTWEDPNHVVPDTGAKG-DNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGE 274
Query: 608 XXWXLIPID 634
W L+ ID
Sbjct: 275 TDWKLVAID 283
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 352 IWQDVTKGXVRFVNDIFTHRGYLWNLRCPARTPGEXPXSX*XLXRARGATTNXVXXIXIG 531
I QD KG RFV++IF H+GY+WN +T E P A+G + + I +G
Sbjct: 123 IKQDEKKGVARFVHNIFPHKGYIWNYGALPQT-WEDPNHVVPDTGAKG-DNDPIDVIEVG 180
Query: 532 ERVASXGDVYPVK 570
+VA G V VK
Sbjct: 181 SKVAGRGAVLQVK 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = +2
Query: 428 YGALPAHLGRXLNHXXP*XGREGRQRTXXXXXXXXXXXXXXXTYTP*KXLGTLALIDXXH 607
YGALP NH P G +G K LGTLALID
Sbjct: 148 YGALP-QTWEDPNHVVPDTGAKG-DNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGE 205
Query: 608 XXWXLIPID 634
W L+ ID
Sbjct: 206 TDWKLVAID 214
>AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical
protein F58H7.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 697 LGLPSXPRXXGLGLYKVSRTPSPXEIXSPXGLAXPN 804
+GLP+ P G+G+Y + P GL+ PN
Sbjct: 154 VGLPAFPPTIGVGVYPTHGPNGLNALNGPNGLSGPN 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,699,448
Number of Sequences: 27780
Number of extensions: 190056
Number of successful extensions: 252
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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