Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C17
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0032 - 13953323-13955269 36 0.041
03_02_0767 - 11009682-11010251 34 0.17
10_01_0342 - 3764967-3765355,3766094-3766298 32 0.51
03_05_0716 + 27087983-27088420,27090048-27090133,27090234-270903... 31 0.89
02_02_0317 + 8893593-8894207 31 1.2
08_02_1400 + 26779193-26779245,26779622-26779766,26779950-267810... 30 2.0
05_01_0556 - 4876849-4877328 30 2.0
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 30 2.0
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 30 2.7
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084 30 2.7
04_03_0670 - 18544745-18545119,18545319-18545551,18546377-185464... 30 2.7
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 30 2.7
04_01_0543 - 7039139-7039573 29 3.6
06_01_1004 - 7802989-7803498 29 4.7
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 29 4.7
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 29 4.7
12_01_0780 + 7136996-7137149,7137212-7137279,7137353-7137573,713... 29 6.2
03_05_0366 - 23505755-23506441 29 6.2
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 29 6.2
10_05_0063 + 8708237-8708373,8708533-8708554 28 8.3
09_02_0135 - 4721645-4722277,4722952-4723014,4723361-4724287 28 8.3
07_03_1293 - 25563431-25563545,25564078-25564196,25564300-255644... 28 8.3
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013... 28 8.3
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614... 28 8.3
06_02_0074 - 11461300-11461681,11461744-11462009 28 8.3
05_05_0392 + 24629528-24630442 28 8.3
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 28 8.3
02_04_0583 + 24078766-24079800,24080585-24081643 28 8.3
01_01_0601 - 4476261-4476728 28 8.3
>09_04_0032 - 13953323-13955269
Length = 648
Score = 35.9 bits (79), Expect = 0.041
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 339 RPEEESRVASGRQRLIGVGGHPQTPVDID 253
RP +++ ASG ++L+ VGG P P D+D
Sbjct: 328 RPSQQTTTASGAKKLVFVGGEPDVPYDLD 356
>03_02_0767 - 11009682-11010251
Length = 189
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 131 RSTWGRPRLFSSVRSAQESSRDSSVSVALMSSLDPASGTWGSISTGVWG*PPTPI-RRWR 307
R W R L V +S D + L LD A W +S V+G + RRWR
Sbjct: 71 RDRW-RDHLARDVFHRHFTSADDTELARLCLHLDDAGHRWKHVSRAVYGRSSCAVKRRWR 129
Query: 308 PLATRDSSSGRCWPP 352
L D+ W P
Sbjct: 130 ELRKSDAFLSALWRP 144
>10_01_0342 - 3764967-3765355,3766094-3766298
Length = 197
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Frame = -2
Query: 270 TPVDIDPQVPDAGSKLD------ISATETELSRDDSCADRTEENSRGLPHVDRDPPSVQP 109
T + I P V AGS L +S SR S N G P +D P S+ P
Sbjct: 8 TFLSIRPTVSSAGSLLSKKPAAFVSLASERKSRPLSPCFAISSNKPGDPKIDVSPFSISP 67
Query: 108 AGAVNPITSASSKW 67
VNP+ +W
Sbjct: 68 VVLVNPVPVDGERW 81
>03_05_0716 +
27087983-27088420,27090048-27090133,27090234-27090324,
27090773-27090841,27091573-27091653,27091730-27091895,
27092084-27092129,27092207-27092287,27093557-27093639,
27093756-27093799,27093896-27093991
Length = 426
Score = 31.5 bits (68), Expect = 0.89
Identities = 24/98 (24%), Positives = 47/98 (47%)
Frame = -2
Query: 483 QILLGL*LHPHDLRDEVIPGRSCVRDTGTDIRXINAEXSPDRQPGGQHRPEEESRVASGR 304
Q+L+ L PH++R I GR+C D +D + ++Q + E E + +
Sbjct: 267 QMLIDLLDDPHEIRRICIMGRNCTLDKLSD--NMECSVPLEKQIAEEEEEEIEMLLENYL 324
Query: 303 QRLIGVGGHPQTPVDIDPQVPDAGSKLDISATETELSR 190
QR + G + +D ++ D+ +++S+ E+SR
Sbjct: 325 QRCESIHGQAERLLDSAREMEDS-IAVNLSSRRLEVSR 361
>02_02_0317 + 8893593-8894207
Length = 204
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +2
Query: 230 DPASGTWGSISTGVWG*PPTPIRRWRP----LATRDSSS--GRCWPPG 355
DPAS + ++G W P P+ WRP A +S S GR W PG
Sbjct: 40 DPASDGQEAAASGGWDADPRPLISWRPDPVGEAGEESGSRCGRRWRPG 87
>08_02_1400 +
26779193-26779245,26779622-26779766,26779950-26781059,
26781153-26781404,26782150-26782230,26782623-26782770,
26782858-26783264,26783557-26783613
Length = 750
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -2
Query: 288 VGGHPQTPVDIDPQVPDAGSK--LDISATETELSRDDSCADRTEENSRGLPHVDRDPPS 118
+GG + V P + D+ K LDI TE SRD C DR RGL RD S
Sbjct: 99 LGGSSSSRVFEYPSIGDSDRKTALDIPNGSTEYSRDSHCFDR-PAGLRGLRIDSRDADS 156
>05_01_0556 - 4876849-4877328
Length = 159
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 126 GRGQRGEDRGYSLRSGPHKSRPGTAQSPWR*CRV*IQRP-VLGGRYRPEF-----GDDRP 287
G G G+ G G S+ S R CR +Q P ++GGR R E D+
Sbjct: 26 GHGPDGDGHGGRHDPGNPVSKQAAEHSGQRPCRS-LQTPAIVGGRLRREALGAAEDDEER 84
Query: 288 RQ*GVGGRSLREIP 329
R+ GVGG E+P
Sbjct: 85 REAGVGGDDEGEVP 98
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 406 ITYAAAAWYHLIP-QVMRVKLQAQQNLALRTIVGAGRYVSNAVIARDLDV 552
++YAA AW ++P Q++R ++Q + AL ++V G VS V R L V
Sbjct: 68 LSYAAIAWLRVVPMQLVRSRVQLAKIAAL-SLVFCGSVVSGNVSLRYLPV 116
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = -2
Query: 408 DTGTDIRXINAEXSPDRQPGGQHRPEEESRVASGRQRLIGVGGHPQTPVDIDPQVPDAGS 229
D G D + +P++ P +H + +GRQ + + + P DIDP G
Sbjct: 352 DEGDDSNKSGDKGTPNKPP--KHTMPRKK--LAGRQ-MPKIRTSSRKPSDIDP----TGK 402
Query: 228 KLDISATETELSRDDSCADRTEENSRGLPHVDRDPPSVQ 112
+ D +ATE LS+D ++ + P + P Q
Sbjct: 403 EPDPAATEPNLSKDAEPTAESQPTAESQPTAESQPTGAQ 441
>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
Length = 197
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 93 DLLPQLAGPMEGRGQRGEDRGYSLRSGPHKSRP 191
DL P+++G G G+R DRG R H RP
Sbjct: 87 DLAPRISGRQRGGGRRPWDRGRRRRRLEHGGRP 119
>04_03_0670 -
18544745-18545119,18545319-18545551,18546377-18546476,
18546842-18546910,18547822-18547900,18547989-18548224
Length = 363
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 111 PAGAVNPITSASSKWPQRGSWMTRSR--RCRR 22
P G ASSKWP RG WM R RCRR
Sbjct: 226 PPGRHRTEQLASSKWPVRG-WMRRRHKPRCRR 256
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 349 RPTPAGGGISRSERPPTPYWRGRSSPNSG 263
RP P G G + + +PY GRS+P +G
Sbjct: 124 RPAPCGRGATAARANSSPYGGGRSAPAAG 152
>04_01_0543 - 7039139-7039573
Length = 144
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 64 RPFRGCRGYWIYCPSWLDRWR--VAVNVGKTAAILFGPVRTRVVPGQLSLRGANVEFRSS 237
+P G W+ W+ R A++ G T + GP +T +VP S + + SS
Sbjct: 83 QPLAGNVSGWLAFQQWISRSPDLAAIDFGATGSSTSGPQQTAMVPNLHSFSPSILSTNSS 142
Query: 238 VR 243
VR
Sbjct: 143 VR 144
>06_01_1004 - 7802989-7803498
Length = 169
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = +2
Query: 131 RSTWGRPRLFSSVRSAQESSRDSSVSVALMSSLDPASG-----TWGSISTGVWG*PPTPI 295
R WG L V ++ D + L LD +G W +S V+G +
Sbjct: 74 RDRWG-DHLARDVFHRPFTAADDAELARLCLRLDDDAGFAAGRRWKDVSRAVYGRSSCAV 132
Query: 296 -RRWRPLATRDSSSGRCWPP 352
RRWR L D+ G W P
Sbjct: 133 KRRWRELRRSDAFLGALWRP 152
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 102 PQLAGPMEGRGQRGEDRGYSLRSGPHKSRPGTAQSPWR 215
P +AGP G G R GP +PG A PW+
Sbjct: 71 PDVAGPSRQPGAAGPSREPGAAGGPR--QPGAAGGPWQ 106
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 15 LFADDSAYFASSNFPSAAISRMQRLLDLLPQLAGPMEGRGQRGEDRGYSLRSGPHKS 185
LFAD + A++ +A +S Q +DL AG + D +S+R P+KS
Sbjct: 292 LFADAAFQSANAPLEAATVSHTQDKIDL---FAGRLSSADSFTSDTEFSVRGSPNKS 345
>12_01_0780 +
7136996-7137149,7137212-7137279,7137353-7137573,
7137861-7137948
Length = 176
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -2
Query: 378 AEXSPDRQPGGQHRPEEESRVASGRQRLIGVGGHPQTPVDIDPQVPDAGSKLDISATETE 199
A+ SP R G EESR+ SG +G G + VD PQV + D A ET+
Sbjct: 21 ADESPPRPTG------EESRLGSGGSSRLGSGQAARKQVDDAPQVVEVDEDADF-APETK 73
>03_05_0366 - 23505755-23506441
Length = 228
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -1
Query: 343 TPAGGGISRSERPPTPYWRGRSSPNSGRYRPPSTG---RWI 230
T GGG R R PT +WR S P + R STG RW+
Sbjct: 14 TVVGGGHRR--RQPTTWWRVDSPPPASRRAAWSTGDGRRWL 52
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 334 GGGISRSE-RPPTPYWRGRSSPNSGRY-RPPSTGR 236
G G RS R +P +RGRS S RY R PS GR
Sbjct: 111 GSGRRRSRSRSRSPRYRGRSRSRSPRYRRSPSYGR 145
>10_05_0063 + 8708237-8708373,8708533-8708554
Length = 52
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1
Query: 361 PATWRPTPAGGGISRSERPPTPYWRGRSSPNSGR 260
PA+ P P GGG+ + PPTP SSP S R
Sbjct: 15 PASRSPRPVGGGV-HGQPPPTP----MSSPFSSR 43
>09_02_0135 - 4721645-4722277,4722952-4723014,4723361-4724287
Length = 540
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Frame = +2
Query: 74 EDAEVIGFTAPAG-------WTDGGSRSTWGRPRLFSSVR 172
EDA V G+ PAG WT G S W P F R
Sbjct: 410 EDASVAGYDVPAGTRVLVNTWTIGRDPSVWDSPEQFRPER 449
>07_03_1293 -
25563431-25563545,25564078-25564196,25564300-25564467,
25564565-25564627,25564709-25564816,25565125-25565237,
25565313-25565609,25565724-25565802,25566116-25566224,
25566324-25566365,25567023-25567153,25568100-25568648
Length = 630
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 99 LPQLAGPMEGRGQRGEDRGYSLRSG 173
+P+ G +EG G RG D+G+ G
Sbjct: 116 IPEEGGDVEGEGGRGLDKGFGFNKG 140
>07_03_1133 -
24199643-24200422,24200786-24200968,24201241-24201321,
24201439-24201567,24201814-24201885,24201970-24202038,
24202130-24202513,24203813-24203926,24204033-24204074
Length = 617
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 471 PAESGSSHDSRSRALRQ*CRNRPGSG 548
P+E+GSSH+S S+ R + GSG
Sbjct: 363 PSEAGSSHNSTSKRKEDEVRRKKGSG 388
>06_03_1119 +
27760412-27760527,27760851-27761010,27761283-27761449,
27761525-27761629,27762097-27762864,27762942-27763131,
27763763-27763940,27764106-27764497
Length = 691
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 299 RWRPLATRDSSSGRCWPPGCR-SGLXSAFIXRMSVPVSRT 415
+WRPL+ DS CW S L + + SV VS T
Sbjct: 303 QWRPLSVTDSGHSNCWVTYLEVSNLECNSLQQFSVEVSIT 342
>06_02_0074 - 11461300-11461681,11461744-11462009
Length = 215
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 162 ENSRGLPHVDRDPPSVQPAGAVNPITSASSKWPQRGSWMTRSRRCRRQTA 13
E +RG H +RD + + VN +SK R W R RR + A
Sbjct: 53 EGARGDGHYERDGRATEVTMEVNRRLRMASKEATRAGWRGRGRRTLTERA 102
>05_05_0392 + 24629528-24630442
Length = 304
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/80 (28%), Positives = 30/80 (37%)
Frame = -2
Query: 339 RPEEESRVASGRQRLIGVGGHPQTPVDIDPQVPDAGSKLDISATETELSRDDSCADRTEE 160
RP ++ R A+ G PQ + P+ G A ET + + T
Sbjct: 198 RPPDQRRTAASAGAAAGAASGPQRKPPVPPR--PCGRASPRRAQET----NSPASSTTTT 251
Query: 159 NSRGLPHVDRDPPSVQPAGA 100
SRG P PP Q AGA
Sbjct: 252 QSRGPPPHCSSPPPPQDAGA 271
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 267 PVDIDPQ-VPDAGSKLDISATETELSRDDSCADRTEENS 154
P + P+ VPD+G K +A ++ DD + EENS
Sbjct: 272 PARVHPEIVPDSGKKKKKAARKSSSDEDDVEVEENEENS 310
>02_04_0583 + 24078766-24079800,24080585-24081643
Length = 697
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 99 LPQLAGPMEGRGQRGEDRGYSLRSGPHKSRPGTAQSPWR 215
+PQ A P+EG+ ++ E++ + P K P A W+
Sbjct: 268 VPQEAKPIEGKAKKAEEK--LMAVDPRKGDPAPAMEEWK 304
>01_01_0601 - 4476261-4476728
Length = 155
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 411 VRSCGLVSPHPAGHAGEVTGPAESGSSHDSRSRALRQ*CRNRPGSGCGVARGVH 572
V S G P H G G H R RA R+ R GS G H
Sbjct: 31 VASTGTAGAGPTDHRGRRRAVTGDGGRHRERRRAAREAARGNGGSEGEGGGGAH 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,375,924
Number of Sequences: 37544
Number of extensions: 678537
Number of successful extensions: 2503
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2502
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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