Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C17
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 31 1.4
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 31 1.4
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 30 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.2
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 29 3.2
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 29 3.2
Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 5.6
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 28 9.7
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 28 9.7
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 9.7
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 9.7
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -2
Query: 240 DAGSKLDISATETELSRDDSCADRTEENSRGLPHVDRDPPSVQPAGAVN-PITSASSKWP 64
D +DI+ +E+ D S AD S +P D PP+ G ++ + +SK
Sbjct: 208 DESESMDIANSESGNDSDSSEADPRTIPSFSIPLPDTPPPNFAKRGEIHVDVDQKNSK-- 265
Query: 63 QRGSWMTRSRRCRRQTAKKPV 1
Q G + R R ++A P+
Sbjct: 266 QSGESQSPWERAREKSASNPL 286
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -2
Query: 240 DAGSKLDISATETELSRDDSCADRTEENSRGLPHVDRDPPSVQPAGAVN-PITSASSKWP 64
D +DI+ +E+ D S AD S +P D PP+ G ++ + +SK
Sbjct: 222 DESESMDIANSESGNDSDSSEADPRTIPSFSIPLPDTPPPNFAKRGEIHVDVDQKNSK-- 279
Query: 63 QRGSWMTRSRRCRRQTAKKPV 1
Q G + R R ++A P+
Sbjct: 280 QSGESQSPWERAREKSASNPL 300
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = -2
Query: 339 RPEEESRVASGRQRLIGVGGHPQTP--VDIDPQVPDAGSKLDISATETELSRDD--SCAD 172
RP + +R A Q + GVG +P + +DP P A S +A+ +++ + D
Sbjct: 628 RPNDTTRQA---QLVNGVGDQTVSPRPIPLDPSPPRATSGGSTAASTASWAKEPIINVED 684
Query: 171 RTEENSRGLPHVDRDPPSVQPAGAVNPITSASS 73
S G P V P G NP+++AS+
Sbjct: 685 DKPSTSSG-PSTTTASHPVNPIGIANPLSAASA 716
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = -2
Query: 255 DPQVP-DAGSKLDISATETELSRDDSCADRT--EENSRGLPHVDRDPPSVQPAGAVNPIT 85
DP++P +K+++SA T + T GLP + PP P G + PIT
Sbjct: 680 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 739
Query: 84 SASSKWPQRG 55
P G
Sbjct: 740 GGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = -2
Query: 255 DPQVP-DAGSKLDISATETELSRDDSCADRT--EENSRGLPHVDRDPPSVQPAGAVNPIT 85
DP++P +K+++SA T + T GLP + PP P G + PIT
Sbjct: 680 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 739
Query: 84 SASSKWPQRG 55
P G
Sbjct: 740 GGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = -2
Query: 255 DPQVP-DAGSKLDISATETELSRDDSCADRT--EENSRGLPHVDRDPPSVQPAGAVNPIT 85
DP++P +K+++SA T + T GLP + PP P G + PIT
Sbjct: 263 DPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPIT 322
Query: 84 SASSKWPQRG 55
P G
Sbjct: 323 GGPPPPPPPG 332
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 29.5 bits (63), Expect = 3.2
Identities = 30/128 (23%), Positives = 47/128 (36%)
Frame = -2
Query: 390 RXINAEXSPDRQPGGQHRPEEESRVASGRQRLIGVGGHPQTPVDIDPQVPDAGSKLDISA 211
R NA SP HRP+++ +A+ + GH P ++ +P S++
Sbjct: 293 RAFNAVRSPVVSMDLHHRPKDDVTLATSTASPLSFSGHRAPPAEVRETLP-MSSQVSTFL 351
Query: 210 TETELSRDDSCADRTEENSRGLPHVDRDPPSVQPAGAVNPITSASSKWPQRGSWMTRSRR 31
E SR T+ V PP Q N +T+ S R +RSR
Sbjct: 352 RGNESSRHSYSNPSTK--------VTTTPPIQQSHLGTNYLTTVQSSNLDRSPSPSRSRY 403
Query: 30 CRRQTAKK 7
+ +K
Sbjct: 404 MNSRDRRK 411
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 29.5 bits (63), Expect = 3.2
Identities = 30/128 (23%), Positives = 47/128 (36%)
Frame = -2
Query: 390 RXINAEXSPDRQPGGQHRPEEESRVASGRQRLIGVGGHPQTPVDIDPQVPDAGSKLDISA 211
R NA SP HRP+++ +A+ + GH P ++ +P S++
Sbjct: 293 RAFNAVRSPVVSMDLHHRPKDDVTLATSTASPLSFSGHRAPPAEVRETLP-MSSQVSTFL 351
Query: 210 TETELSRDDSCADRTEENSRGLPHVDRDPPSVQPAGAVNPITSASSKWPQRGSWMTRSRR 31
E SR T+ V PP Q N +T+ S R +RSR
Sbjct: 352 RGNESSRHSYSNPSTK--------VTTTPPIQQSHLGTNYLTTVQSSNLDRSPSPSRSRY 403
Query: 30 CRRQTAKK 7
+ +K
Sbjct: 404 MNSRDRRK 411
>Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical
protein ZK1128.3 protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -2
Query: 426 GRSCVRDTG-TDIRXINAEXSPDRQ-PGGQHRPEEESRVASGRQRLIGVGGHPQTPVDI 256
GR ++ TG DI + E + + + PGG H+ +R + RQR+ G+ QT VD+
Sbjct: 8 GRRIIQYTGFDDIDEEDVEPNEEAEGPGGVHKKRRGARKKNRRQRMEGLENVDQT-VDL 65
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 111 PAGAVNPITSASSKWPQRGSWMTRSRRCRRQTAKK 7
P + PI+SA W +W R CR Q ++K
Sbjct: 890 PNAVIRPISSALYLWRVTDTWTECDRACRGQQSQK 924
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 111 PAGAVNPITSASSKWPQRGSWMTRSRRCRRQTAKK 7
P + PI+SA W +W R CR Q ++K
Sbjct: 890 PNAVIRPISSALYLWRVTDTWTECDRACRGQQSQK 924
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 334 GGGISRSERPPTPYWRGRSSPNSGRYRPPSTGR 236
G ISR + PT RGR + +G R + GR
Sbjct: 646 GSSISRHSKQPTTRGRGRGARGAGASRETTRGR 678
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 287 TPIRRWRP--LATRDSSSGRCWPPGCRSGLXSAFIXRMSVPVSRTQLRPGITSSRRSCG* 460
T ++R+ P + RD G G R GL S+ +S+ SR+ L +S+ R C
Sbjct: 84 TSLKRYPPAHMRVRDKLVGILSASGLRIGLPSS----VSLVFSRSDLGSATSSTERICAS 139
Query: 461 SYRPSRIWLFAR*SEQGVTSVMP 529
S + S+ G+T P
Sbjct: 140 SQEVASTMSLPDPSQSGITDSFP 162
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 287 TPIRRWRP--LATRDSSSGRCWPPGCRSGLXSAFIXRMSVPVSRTQLRPGITSSRRSCG* 460
T ++R+ P + RD G G R GL S+ +S+ SR+ L +S+ R C
Sbjct: 2256 TSLKRYPPAHMRVRDKLVGILSASGLRIGLPSS----VSLVFSRSDLGSATSSTERICAS 2311
Query: 461 SYRPSRIWLFAR*SEQGVTSVMP 529
S + S+ G+T P
Sbjct: 2312 SQEVASTMSLPDPSQSGITDSFP 2334
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 287 TPIRRWRP--LATRDSSSGRCWPPGCRSGLXSAFIXRMSVPVSRTQLRPGITSSRRSCG* 460
T ++R+ P + RD G G R GL S+ +S+ SR+ L +S+ R C
Sbjct: 2284 TSLKRYPPAHMRVRDKLVGILSASGLRIGLPSS----VSLVFSRSDLGSATSSTERICAS 2339
Query: 461 SYRPSRIWLFAR*SEQGVTSVMP 529
S + S+ G+T P
Sbjct: 2340 SQEVASTMSLPDPSQSGITDSFP 2362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,231,978
Number of Sequences: 27780
Number of extensions: 454348
Number of successful extensions: 1537
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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