Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C16
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 331 3e-91
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 331 3e-91
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 331 3e-91
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 331 3e-91
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 263 9e-71
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 263 9e-71
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 128 4e-30
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.7
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.0
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 29 5.3
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 331 bits (814), Expect = 3e-91
Identities = 156/258 (60%), Positives = 185/258 (71%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIMEIQL 585
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 586 NGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXPXXN 765
NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKT 244
Query: 766 TXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 245 HKGLRKVACIGAWHPSRV 262
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 331 bits (814), Expect = 3e-91
Identities = 156/258 (60%), Positives = 185/258 (71%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIMEIQL 585
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 586 NGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXPXXN 765
NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKT 244
Query: 766 TXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 245 HKGLRKVACIGAWHPSRV 262
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 331 bits (814), Expect = 3e-91
Identities = 156/258 (60%), Positives = 185/258 (71%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIMEIQL 585
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 586 NGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXPXXN 765
NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKT 244
Query: 766 TXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 245 HKGLRKVACIGAWHPSRV 262
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 331 bits (814), Expect = 3e-91
Identities = 156/258 (60%), Positives = 185/258 (71%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIMEIQL 585
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 586 NGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXPXXN 765
NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKT 244
Query: 766 TXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 245 HKGLRKVACIGAWHPSRV 262
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 263 bits (645), Expect = 9e-71
Identities = 114/163 (69%), Positives = 135/163 (82%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 534
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 754 PXXNTXGFRKXACXGPWXPSRV 819
P G RK AC G W PSRV
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRV 214
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 642 YXCSILCLPKMKMIDCXGVPRAKDTKVSLFRWPTKXLXX*XHXG 773
Y SI + +MID GV R K RW TK L H G
Sbjct: 156 YCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 263 bits (645), Expect = 9e-71
Identities = 114/163 (69%), Positives = 135/163 (82%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 225
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 226 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKC 405
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW K
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 406 KKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQM 534
KKKAFTK + KWQDE G+K I DF + +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 754 PXXNTXGFRKXACXGPWXPSRV 819
P G RK AC G W PSRV
Sbjct: 193 PRKTHKGLRKVACIGAWHPSRV 214
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 642 YXCSILCLPKMKMIDCXGVPRAKDTKVSLFRWPTKXLXX*XHXG 773
Y SI + +MID GV R K RW TK L H G
Sbjct: 156 YCSSIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (310), Expect = 4e-30
Identities = 69/141 (48%), Positives = 84/141 (59%)
Frame = +1
Query: 397 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIME 576
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 577 IQLNGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXP 756
IQ+NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLP 143
Query: 757 XXNTXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 144 RKTHKGLRKVACIGAWHPSRV 164
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 132
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (310), Expect = 4e-30
Identities = 69/141 (48%), Positives = 84/141 (59%)
Frame = +1
Query: 397 YKCKKKAFTKASXKWQDELGRKSIXKDFXXMIRYCSVVRVIAHTQMKLLKQRQXKAHIME 576
Y+ + KAFTK + KWQDE G+K I DF + +YCS +RVIAHTQMK+L++RQ KAH++E
Sbjct: 25 YRGRIKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 84
Query: 577 IQLNGGTIEDKVKWATEHLEKPXPVRFCVCPR*K*LTALVSPGQRIQRCXFSVGPXXNXP 756
IQ+NGGTIE KV WA EHLEK V T V+ G + S P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLP 143
Query: 757 XXNTXGFRKXACXGPWXPSRV 819
G RK AC G W PSRV
Sbjct: 144 RKTHKGLRKVACIGAWHPSRV 164
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 46 FQHPAHGSMGFYPKKRSRRHRGKVKAFPK 132
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 271 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 399
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 252 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 419
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 554 KXRLTLWKSNLTVVPSRTK*NGPQNIWRNLXLFDS 658
K RL L K +V S K GPQ W N+ L ++
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHET 507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,479,753
Number of Sequences: 27780
Number of extensions: 394422
Number of successful extensions: 971
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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