Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C09
(912 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 9e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 8e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 3e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 41 1e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 40 3e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 2.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 5.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 8.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 8.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 8.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 8.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 54.0 bits (124), Expect = 2e-09
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Frame = +3
Query: 123 CENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIREXESTVRILAD 281
C + D LL+ Y+R P S +VV L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 282 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAGTTAGDYALRXRVSN-NGS 455
L+ W D + W+ E+G T L V SE +W PD+VL N A G + + + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 456 VXWIKRLDISTPISMQLXNWPNXMQTC 536
V W + + + +P QTC
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 53.6 bits (123), Expect = 2e-09
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IREXESTVRILADLQMNW 296
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 297 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAGT---TAGDYALRXRVSNNGSVXWI 467
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 468 KRLDISTPISMQLXNWPNXMQTC 536
RL I M L N+P Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-08
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Frame = +3
Query: 123 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIREXESTVRILADLQ 287
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 288 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAGTTAGDYALRXRVSNNGSV 458
+ W L+W + E+ ++ V S +W PD+V+ + + G ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 459 XWIKRLDISTPISMQLXNWPNXMQTCTFXV 548
+ + WP + CT +
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHI 177
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-08
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Frame = +3
Query: 123 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIREXESTVRILAD 281
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 282 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAGTTAGDYALRXRVSNNGS 455
++ +W D +L W+ E+G L V S+ +WRPD+VL NA G A + ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 456 VXWIKRLDISTPISMQLXNWPNXMQTC 536
V W + + + +P QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 201 KIVVNLTL-HLRHANIREXESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 374
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 375 PDVVLLNAA-GTTAGDYALRXRVSNNGSVXWIKRLDISTPISMQLXNWPNXMQTC 536
PD+VL N A G Y + NG V W+ + ++ + +P QTC
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 150 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIREXESTVRILAD---LQMNWIDKRLS 314
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 315 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAGTTAGDYALRXRVSNNGSVXWIKRLDIST 488
W E+G L V S+ +WRPD+VL NA G + V +G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPAVYKS 151
Query: 489 PISMQLXNWPNXMQTC 536
S+ + +P +QTC
Sbjct: 152 SCSIDVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 150 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIREXESTVRILAD---LQMNWIDKRLS 314
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 315 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAGTTAGDYALRXRVSNNGSVXWIKRLDIST 488
W E+G L V S+ +WRPD+VL NA G A + + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 489 PISMQLXNWPNXMQTC 536
+ + +P QTC
Sbjct: 152 SCEIDVEYFPFDEQTC 167
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 9e-08
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 138 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IREXESTVRILADLQMNWID 302
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 303 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAGTTAGDYALRX---RVSNNGSVXWIKR 473
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 474 LDISTPISMQLXNWPNXMQTC 536
L I M+L N+P Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +3
Query: 150 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIREXESTVRILADLQMNWIDKRLS 314
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 315 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TAGDYALRXRVSNNGSVXWI 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +3
Query: 150 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIREXESTVRILADLQMNWIDKRLS 314
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 315 WNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TAGDYALRXRVSNNGSVXWI 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Frame = +3
Query: 150 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIREXESTVRILADLQMNWIDKR 308
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 309 LSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAGTTAGDYALRXRVSNNGSVXWIKRLDI 482
L WN ++G T V SE +W PD+VL NA G + + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIY 141
Query: 483 STPISMQLXNWPNXMQTC 536
+ + + +P QTC
Sbjct: 142 KSFCEIDVEYFPFDEQTC 159
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWI 467
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.4 bits (105), Expect = 4e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWIKRLDISTPISMQLXNWPNXMQTC 536
G Y V+++GS ++ + M + +P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 4e-07
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Frame = +3
Query: 150 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIREXESTVRILAD---LQMNWIDKRLS 314
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 315 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAGTTAGDYALRXRVSNNGSVXWIKRLDIST 488
WN E+G L V SE +W PD+VL NA G + + G V W +
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSWKPPAIYKS 156
Query: 489 PISMQLXNWPNXMQTC 536
+ + +P Q+C
Sbjct: 157 SCEINVEYFPFDEQSC 172
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWIKRLDISTPISMQLXNWPNXMQTC 536
G Y V+++GS ++ + M + +P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Frame = +3
Query: 204 IVVNLTLHLRHANIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 380
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 381 VVLLNAAGTTAGDYALRXR--VSNNGSVXWIKRLDISTPISMQLXNWPNXMQTC 536
+L N A + VS+ G V W+ + + + +P Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWI 467
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWI 467
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 240 NIREXESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAGT-TA 413
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 414 GDYALRXRVSNNGSVXWI 467
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 282 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAGT-TAGDYALRXRVSNNGS 455
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 456 VXWIKRLDISTPISMQLXNWPNXMQTC 536
++ + + + +P Q C
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 3e-06
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Frame = +3
Query: 150 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIREXESTVRILADLQMNWIDKR 308
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 309 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAGTTAGDYALRX---RVSNNGSVXWIKR 473
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 474 LDISTPISMQLXNWPNXMQTCTFXVRFY 557
+ ++ M L +P Q C+ + Y
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.1 bits (92), Expect = 1e-05
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIREXESTVRILADLQMNW 296
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 297 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------GTTAGDYALRXRVSNN 449
D RL++ G T V SE +W PD +N TT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 450 GSVXWIKRLDISTPISMQLXNWPNXMQTCTFXVRFY 557
GS+ RL I+ M L +P Q C + +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 159
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Frame = +3
Query: 150 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIREXESTVRILADLQMNWIDKR 308
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 309 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAGTTAGDYALRX---RVSNNGSVXWIKR 473
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 474 LDISTPISMQLXNWPNXMQTCTFXVRFY 557
+ ++ M L +P Q C+ + Y
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASY 181
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Frame = +3
Query: 153 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IREXESTVRILADLQMNWIDKRLSWN 320
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 321 AGEWGCSTWLVSSERLWRPDVVLLNAAGTTAGDYALRX---RVSNNGSVXWIKRLDISTP 491
E + +E++W PD N + D R R+S +GSV + R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 492 ISMQLXNWPNXMQTCTFXVRFY 557
M L +P Q CT + Y
Sbjct: 161 CMMDLHYYPLDSQNCTVEIESY 182
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.9 bits (89), Expect = 3e-05
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIREXESTVRILADLQMNW 296
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 297 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------GTTAGDYALRXRVSNN 449
D RL++ G T V SE +W PD +N TT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 450 GSVXWIKRLDISTPISMQLXNWPNXMQTCTFXVRFY 557
GS+ RL I+ M L +P Q C + +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 159
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.008
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +3
Query: 294 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------GTTAGDYALRXRVSN 446
W D RL++ G T V SE +W PD +N TT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 447 NGSVXWIKRLDISTPISMQLXNWPNXMQTCTFXVRFY 557
+GS+ RL I+ M L +P Q C + +
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 98
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.8 bits (49), Expect = 2.2
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +3
Query: 360 ERLWRPDVVLLNAAGTTAGDYALRXRVSN-----NGSVXWIKRLDISTPISMQLXNWPNX 524
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 525 MQTCTFXVRFY 557
+Q C + +
Sbjct: 127 IQICPIYIESF 137
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +3
Query: 360 ERLWRPDVVLLNAAGTTAGDYALRXR---VSNNGSVXWIKRLDISTPISMQLXNWPNXMQ 530
+ +WRPD NA T + + + ++ ++ +L + +M +P+ Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 531 TC 536
C
Sbjct: 176 EC 177
Score = 21.8 bits (44), Expect = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 883 PXPPPPPXS 909
P PPPPP S
Sbjct: 341 PAPPPPPPS 349
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 372 RPDVVLLNAAGTTAGDYALRXRVSNNGSV 458
+PD++ + A G+ GD +V NG++
Sbjct: 32 QPDIIWVRADGSAVGDVPGLRQVLPNGNL 60
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 372 RPDVVLLNAAGTTAGDY 422
+P V AAG T GDY
Sbjct: 707 KPQVTWKKAAGDTPGDY 723
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 99 QVRRNGNKNNISRRHFI 49
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 99 QVRRNGNKNNISRRHFI 49
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 99 QVRRNGNKNNISRRHFI 49
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 99 QVRRNGNKNNISRRHFI 49
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 883 PXPPPPPXS 909
P PPPPP S
Sbjct: 1355 PPPPPPPPS 1363
Score = 21.8 bits (44), Expect = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 883 PXPPPPPXS 909
P PPPPP S
Sbjct: 1356 PPPPPPPSS 1364
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 347 PSAAAPFPCVPTQS 306
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,452
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 72
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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