Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C08
(848 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 110 2e-24
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 110 2e-24
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 93 3e-19
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 84 2e-16
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 84 2e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 84 2e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 81 2e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 75 2e-13
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 75 2e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 65 1e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 62 9e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 60 4e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 59 9e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 59 9e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 59 9e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 59 9e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 59 9e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 1e-05
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 40 0.004
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.017
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 38 0.023
AY118990-1|AAM50850.1| 618|Drosophila melanogaster LP02703p pro... 29 6.1
AE014296-859|AAF47909.1| 618|Drosophila melanogaster CG11349-PA... 29 6.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 110 bits (265), Expect = 2e-24
Identities = 62/199 (31%), Positives = 101/199 (50%)
Frame = +1
Query: 13 VEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSPPTQLALFADDTTVYYSSRNKSLI 192
+ ++S+ R L AGVPQG + IP++ L+LFADD VY + + S I
Sbjct: 652 LNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEI 711
Query: 193 ASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQSI 372
+QS L +++KW++ INP K+ A+ F + P R + + I
Sbjct: 712 NQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKP-------RYLPDRQLRILDSPI 764
Query: 373 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYKTCI 552
W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 765 QWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIF 824
Query: 553 RXVMTYASVGVRSRGPHTH 609
++ Y S V R TH
Sbjct: 825 NPILMYGS-PVWGRCAQTH 842
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 110 bits (265), Expect = 2e-24
Identities = 62/199 (31%), Positives = 101/199 (50%)
Frame = +1
Query: 13 VEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSPPTQLALFADDTTVYYSSRNKSLI 192
+ ++S+ R L AGVPQG + IP++ L+LFADD VY + + S I
Sbjct: 600 LNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEI 659
Query: 193 ASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQSI 372
+QS L +++KW++ INP K+ A+ F + P R + + I
Sbjct: 660 NQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKP-------RYLPDRQLRILDSPI 712
Query: 373 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYKTCI 552
W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 713 QWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIF 772
Query: 553 RXVMTYASVGVRSRGPHTH 609
++ Y S V R TH
Sbjct: 773 NPILMYGS-PVWGRCAQTH 790
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 93.5 bits (222), Expect = 3e-19
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Frame = +1
Query: 10 RVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSP-----PTQLALFADDTTVYYSS 174
R S+ + AGVPQG + +P+ + LA FADD V Y S
Sbjct: 625 RFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRS 684
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
R + A +Q A +W R+W + IN +KS V F +R PP+
Sbjct: 685 RCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFT-----------LKRRTPPPVY 733
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
+ +P KYLGV LD +TF H+ +R R +++ Y ++ RSK+SL NK+T
Sbjct: 734 IEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLT 793
Query: 535 LYK 543
+YK
Sbjct: 794 IYK 796
Score = 32.7 bits (71), Expect = 0.65
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 627 LQSRFCRLAVGAPWFVXNLDLHDDLGLESI 716
+Q++ RL G WFV N LH DL L ++
Sbjct: 824 IQNKVARLITGCEWFVRNTTLHRDLKLATV 853
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 84.2 bits (199), Expect = 2e-16
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Frame = +1
Query: 13 VEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-RSPPTQ-------LALFADDTTVYY 168
V+G +SS +P+ AGVPQG + +P +P T+ +A +ADDT V
Sbjct: 628 VDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLT 687
Query: 169 SSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPP 348
S++ S LQ A QW W V IN K V F R P
Sbjct: 688 KSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFAN-----------RTGSCPG 736
Query: 349 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNK 528
++L + I + KYLG+TLD +TF HI +++ ++R+ +I R+K+SL K
Sbjct: 737 VSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCK 796
Query: 529 VTLYKTCIRXVMTY 570
V +YK+ + + Y
Sbjct: 797 VNIYKSILAPCLFY 810
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 84.2 bits (199), Expect = 2e-16
Identities = 55/189 (29%), Positives = 87/189 (46%)
Frame = +1
Query: 10 RVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSPPTQLALFADDTTVYYSSRNKSL 189
R S+ + AGVPQG IP + ++ FADDT + SR+
Sbjct: 623 RCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQ 682
Query: 190 IASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQS 369
++L + + +W WR+ +N K V F R PP+ L S
Sbjct: 683 ATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFT-----------LNRQDCPPLLLNSIP 731
Query: 370 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYKTC 549
+P A +V YLGV LD +T+R HI++ + + + L+ +I S +SL +KV LY +
Sbjct: 732 LPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSI 791
Query: 550 IRXVMTYAS 576
++ + TY S
Sbjct: 792 LKPIWTYGS 800
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 630 QSRFCRLAVGAPWFVXNLDLHDDLGLESIT 719
QS+ R GAPW+V + ++ DL + S+T
Sbjct: 818 QSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 84.2 bits (199), Expect = 2e-16
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Frame = +1
Query: 13 VEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-RSPPTQ-------LALFADDTTVYY 168
V+G +SS +P+ AGVPQG + +P +P T+ +A +ADDT V
Sbjct: 430 VDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLT 489
Query: 169 SSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPP 348
S++ S LQ A QW W V IN K V F R P
Sbjct: 490 KSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFAN-----------RTGSCPG 538
Query: 349 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNK 528
++L + I + KYLG+TLD +TF HI +++ ++R+ +I R+K+SL K
Sbjct: 539 VSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCK 598
Query: 529 VTLYKTCIRXVMTY 570
V +YK+ + + Y
Sbjct: 599 VNIYKSILAPCLFY 612
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 81.0 bits (191), Expect = 2e-15
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Frame = +1
Query: 1 YWYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP------RSPPTQ--LALFADDT 156
+ RV + S PR + AGVPQG +P + P + LA +ADD
Sbjct: 623 FMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDI 682
Query: 157 TVYYSSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQ-RGNSPLISSRIXRR 333
+ YSS + A LQ L W ++W + +NP K+ F + SP
Sbjct: 683 ALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP--------- 733
Query: 334 NITPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKM 513
+T PI L + + KYLG+TLD +TF PH+K+ R + +L ++ ++S M
Sbjct: 734 -VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTM 792
Query: 514 SLRNKVTLYKTCIRXVMTY 570
+LR K +Y C+ + Y
Sbjct: 793 TLRAKRAVYVHCVAPIWLY 811
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 74.5 bits (175), Expect = 2e-13
Identities = 53/189 (28%), Positives = 79/189 (41%)
Frame = +1
Query: 10 RVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSPPTQLALFADDTTVYYSSRNKSL 189
R + + S + AGVPQG P + FADDT + S+
Sbjct: 621 RCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIK 680
Query: 190 IASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQS 369
+ L ++ +W WR+ IN K V F + PP+ L +
Sbjct: 681 ATALLSRHLTSVERWLADWRISINVQKCKQVTFT-----------LNKQTCPPLVLNNIC 729
Query: 370 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYKTC 549
IP A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 550 IRXVMTYAS 576
++ + TY S
Sbjct: 790 LKPIWTYGS 798
Score = 37.5 bits (83), Expect = 0.023
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 630 QSRFCRLAVGAPWFVXNLDLHDDLGLESITEIXEGQRPNXTSIRVCLMNNPL 785
QSR R+ GAPW++ N ++H DL ++ + E+ ++ + ++ NPL
Sbjct: 816 QSRILRIITGAPWYLRNENIHRDLKIKLVIEVI-AEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 74.5 bits (175), Expect = 2e-13
Identities = 53/189 (28%), Positives = 79/189 (41%)
Frame = +1
Query: 10 RVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPRSPPTQLALFADDTTVYYSSRNKSL 189
R + + S + AGVPQG P + FADDT + S+
Sbjct: 621 RCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIK 680
Query: 190 IASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQS 369
+ L ++ +W WR+ IN K V F + PP+ L +
Sbjct: 681 ATALLSRHLTSVERWLADWRISINVQKCKQVTFT-----------LNKQTCPPLVLNNIC 729
Query: 370 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYKTC 549
IP A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 550 IRXVMTYAS 576
++ + TY S
Sbjct: 790 LKPIWTYGS 798
Score = 37.5 bits (83), Expect = 0.023
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 630 QSRFCRLAVGAPWFVXNLDLHDDLGLESITEIXEGQRPNXTSIRVCLMNNPL 785
QSR R+ GAPW++ N ++H DL ++ + E+ ++ + ++ NPL
Sbjct: 816 QSRILRIITGAPWYLRNENIHRDLKIKLVIEVI-AEKKTKYNEKLTTHTNPL 866
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 65.3 bits (152), Expect = 1e-10
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXN-----YIPRSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + YI R PTQ L+ +ADDT V S
Sbjct: 686 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSD 745
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V+F N +S +
Sbjct: 746 TLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSM--------NVK 797
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
+ Q+I K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+
Sbjct: 798 IKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKIL 857
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 858 ILKSVLSPIWQYA 870
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 62.1 bits (144), Expect = 9e-10
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXN-----YIPRSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + YI R PT+ L+ +ADDT V S
Sbjct: 674 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSD 733
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ + W KW + +N AK+ V+F N S R +
Sbjct: 734 TLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMK-------- 785
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
+ Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+
Sbjct: 786 IKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKML 845
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 846 ILKSVLSPIWQYA 858
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 60.1 bits (139), Expect = 4e-09
Identities = 40/147 (27%), Positives = 67/147 (45%)
Frame = +1
Query: 133 LALFADDTTVYYSSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLI 312
LA +ADDT + S+ L + Q+ +W +KW + IN K+ +LF
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF-------- 335
Query: 313 SSRIXRRNITPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPM 492
S + + NI P + Q K +YLG+ LD +TF H+ ++ + +L +
Sbjct: 336 SLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWL 395
Query: 493 ICKRSKMSLRNKVTLYKTCIRXVMTYA 573
I K S + K+ L+K + + YA
Sbjct: 396 IGKNSHLPKNAKILLWKQIVSPIWHYA 422
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 40/147 (27%), Positives = 67/147 (45%)
Frame = +1
Query: 133 LALFADDTTVYYSSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLI 312
LA +ADDT + S+ L + Q+ +W +KW + IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF-------- 782
Query: 313 SSRIXRRNITPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPM 492
S + + NI P + Q K +YLG+ LD +TF H+ ++ + +L +
Sbjct: 783 SLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWL 842
Query: 493 ICKRSKMSLRNKVTLYKTCIRXVMTYA 573
I K S + K+ L+K + + YA
Sbjct: 843 IGKNSHLPKNAKILLWKQIVSPIWHYA 869
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 40/147 (27%), Positives = 67/147 (45%)
Frame = +1
Query: 133 LALFADDTTVYYSSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLI 312
LA +ADDT + S+ L + Q+ +W +KW + IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF-------- 782
Query: 313 SSRIXRRNITPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPM 492
S + + NI P + Q K +YLG+ LD +TF H+ ++ + +L +
Sbjct: 783 SLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWL 842
Query: 493 ICKRSKMSLRNKVTLYKTCIRXVMTYA 573
I K S + K+ L+K + + YA
Sbjct: 843 IGKNSHLPKNAKILLWKQIVSPIWHYA 869
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 40/147 (27%), Positives = 67/147 (45%)
Frame = +1
Query: 133 LALFADDTTVYYSSRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLI 312
LA +ADDT + S+ L + Q+ +W +KW + IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILF-------- 782
Query: 313 SSRIXRRNITPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPM 492
S + + NI P + Q K +YLG+ LD +TF H+ ++ + +L +
Sbjct: 783 SLKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWL 842
Query: 493 ICKRSKMSLRNKVTLYKTCIRXVMTYA 573
I K S + K+ L+K + + YA
Sbjct: 843 IGKNSHLPKNAKILLWKQIVSPIWHYA 869
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.8 bits (136), Expect = 9e-09
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-----RSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + +P PT+ L+ +ADDT V S
Sbjct: 558 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 617
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V++ N I + + I
Sbjct: 618 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND--IPTNLKTMKIK---- 671
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+
Sbjct: 672 --GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKML 729
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 730 ILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 9e-09
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-----RSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + +P PT+ L+ +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V++ N I + + I
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND--IPTNLKTMKIK---- 787
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+
Sbjct: 788 --GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKML 845
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 846 ILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 9e-09
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-----RSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + +P PT+ L+ +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V++ N I + + I
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND--IPTNLKTMKIK---- 787
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+
Sbjct: 788 --GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKML 845
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 846 ILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.8 bits (136), Expect = 9e-09
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-----RSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + +P PT+ L+ +ADDT V S
Sbjct: 636 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 695
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V++ N I + + I
Sbjct: 696 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND--IPTNLKTMKIK---- 749
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+
Sbjct: 750 --GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKML 807
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 808 ILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.8 bits (136), Expect = 9e-09
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Frame = +1
Query: 19 GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIP-----RSPPTQ---LALFADDTTVYYSS 174
G S + AGVPQG + +P PT+ L+ +ADDT V S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
Query: 175 RNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPIT 354
+ ++ W KW + +N AK+ V++ N I + + I
Sbjct: 734 ILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKND--IPTNLKTMKIK---- 787
Query: 355 LFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVT 534
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+
Sbjct: 788 --GQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKML 845
Query: 535 LYKTCIRXVMTYA 573
+ K+ + + YA
Sbjct: 846 ILKSVLSPIWQYA 858
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 48.4 bits (110), Expect = 1e-05
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Frame = +1
Query: 40 PLTAGVPQGXXXXXXXXXXXXNYIPR--SPPTQLALFADDTTVYYSSRNKSLIASKLQSA 213
P+T G PQG + + + P QL+ +ADD + +++++ K
Sbjct: 627 PVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEK---- 682
Query: 214 ALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPITLFSQSIPWARKVK 393
L W ++ ST+ + L+ + R P + +++P+ R +
Sbjct: 683 GAQLMSIVETWGAEVGDCLSTS----KTVIMLLKGALRR---APTVRFAGRNLPYVRSCR 735
Query: 394 YLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLY 540
YLG+T+ M F HI S+R R ++ L ++ S R + T+Y
Sbjct: 736 YLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 39.9 bits (89), Expect = 0.004
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Frame = +1
Query: 43 LTAGVPQGXXXXXXXXXXXXNYIPRSP---PTQLALFADDTTVYYSSRNKSLIASKLQSA 213
+T GVPQG + I R P +++ FADD + +
Sbjct: 47 VTGGVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRN 106
Query: 214 ALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPI--TLFSQSIPWARK 387
A+ W +++ P K+ AVL ISSR T + TL S S R
Sbjct: 107 IRAIEHWLSSMGLELAPEKTKAVL--------ISSRKAVETATVEVGGTLVSSS----RA 154
Query: 388 VKYLGVTLDASMTFRPHIKSVRDRA 462
+KYL V +D ++FR H+ +A
Sbjct: 155 IKYLEVMIDTRLSFREHLAYASSKA 179
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.9 bits (84), Expect = 0.017
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Frame = +1
Query: 4 WYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNYIPR-SPP--TQLALFADDTTVYYS 171
WY E G RS ++AGVPQG + I S P +L FADD +
Sbjct: 597 WYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAV 654
Query: 172 SRNKSLIASKLQSAALALGQWFRKWRVDINPAKSTAVLFQRGNSPLISSRIXRRNITPPI 351
++ + A A +W K + I K+ VL S + R+ + +
Sbjct: 655 AKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLLSSRKS-VECMRVEVKGV---- 709
Query: 352 TLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILSRLYPMI 495
I A +KYLGV +D ++F+ H + +AA L+R+ P +
Sbjct: 710 -----EIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 37.5 bits (83), Expect = 0.023
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 364 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILSRLYPMICKRSKMSLRNKVTLYK 543
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 544 TCIRXVMTYA 573
+ + + YA
Sbjct: 64 SVLSPIWQYA 73
>AY118990-1|AAM50850.1| 618|Drosophila melanogaster LP02703p
protein.
Length = 618
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 219 SPRTVVPKMARRHQPGEKHSSVISKGKLTAYFLPYXEEKYH 341
S V PK R H+ K ++V K + Y Y E+ YH
Sbjct: 568 SSYVVAPKQLRSHRRSSKRNNVDLKTSASEYDTDYREDGYH 608
>AE014296-859|AAF47909.1| 618|Drosophila melanogaster CG11349-PA
protein.
Length = 618
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 219 SPRTVVPKMARRHQPGEKHSSVISKGKLTAYFLPYXEEKYH 341
S V PK R H+ K ++V K + Y Y E+ YH
Sbjct: 568 SSYVVAPKQLRSHRRSSKRNNVDLKTSASEYDTDYREDGYH 608
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,779,535
Number of Sequences: 53049
Number of extensions: 819874
Number of successful extensions: 1846
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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