Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_C07
         (950 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_04_0085 - 15866060-15866440,15866477-15866533,15866765-158669...    29   5.4  

>01_04_0085 -
           15866060-15866440,15866477-15866533,15866765-15866923,
           15866991-15867186,15867358-15867662
          Length = 365

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = +1

Query: 109 DRLAPRQRTIGSLPPHSKIVXNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXE 288
           +RL PRQR + ++     +   L L ++H + +E E+    +  L  + +   +  N   
Sbjct: 33  ERLQPRQRGMNTVKEMEMLAAKLELLMKHLDDKEKETKQGTVKALDSH-MTCEICGNTGH 91

Query: 289 WGCSTWLVSSERLWRPDVVL 348
            G + W     +L   D VL
Sbjct: 92  SGTTVWRPMKRKLAANDKVL 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,979,700
Number of Sequences: 37544
Number of extensions: 349768
Number of successful extensions: 874
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)