Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C07
(950 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 38 0.027
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 37 0.035
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 37 0.035
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 37 0.035
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 37 0.047
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 37 0.047
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 36 0.11
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 36 0.11
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 36 0.11
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 36 0.11
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 36 0.11
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 36 0.11
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 36 0.11
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 36 0.11
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 36 0.11
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 36 0.11
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 36 0.11
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 36 0.11
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 36 0.11
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 35 0.14
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 35 0.14
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 35 0.14
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 35 0.14
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 35 0.19
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 35 0.19
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 35 0.19
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 35 0.19
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 34 0.25
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 34 0.33
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 34 0.33
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 34 0.33
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 34 0.33
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 34 0.33
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 34 0.33
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 34 0.33
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 34 0.33
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 34 0.33
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 34 0.33
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 34 0.33
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 33 0.44
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 33 0.44
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 33 0.44
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 33 0.44
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 33 0.44
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 37.5 bits (83), Expect = 0.027
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 130 RTIGSLPPHSKIVXNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAXEWG-CST 303
R +G+ + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 304 WLVSSERLWRPDVVL 348
V SE +W PD+VL
Sbjct: 99 LHVPSEHIWHPDIVL 113
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ +W D +L W E+G L V S+ +WRPD+VL
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVL 95
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ +W D +L W E+G L V S+ +WRPD+VL
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVL 114
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ +W D +L W E+G L V S+ +WRPD+VL
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVL 114
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ +W D +L W E+G L V S+ +WRPD+VL
Sbjct: 93 VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVL 129
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 130 RTIGSLPPHSKIVXNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAXEWG-CST 303
R +G+ + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 304 WLVSSERLWRPDVVL 348
V SE +W PD+VL
Sbjct: 99 LHVPSEHIWLPDIVL 113
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLTR 357
L + W D L WN E+ G ++ +LW+PDV++ R
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNR 121
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 127
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 149
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L++ W D L WN+ E+G L + RLW+PDV++
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLM 130
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 97 LEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVL 133
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.11
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVLLTR 357
L + W D L WN E+ G ++ +LW+PDV++ R
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNR 121
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 35.1 bits (77), Expect = 0.14
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 127 QRTIGSLPPHSKIVXNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXEW-GCST 303
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 304 WLVSSERLWRPDVVL 348
++ +LW+PDV++
Sbjct: 104 LRITPNKLWKPDVLM 118
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.14
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 127 QRTIGSLPPHSKIVXNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXEW-GCST 303
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 304 WLVSSERLWRPDVVL 348
++ +LW+PDV++
Sbjct: 104 LRITPNKLWKPDVLM 118
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 35.1 bits (77), Expect = 0.14
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 127 QRTIGSLPPHSKIVXNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXEW-GCST 303
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 304 WLVSSERLWRPDVVL 348
++ +LW+PDV++
Sbjct: 104 LRITPNKLWKPDVLM 118
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 35.1 bits (77), Expect = 0.14
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 127 QRTIGSLPPHSKIVXNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAXEW-GCST 303
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 304 WLVSSERLWRPDVVL 348
++ +LW+PDV++
Sbjct: 104 LRITPNKLWKPDVLM 118
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ W D +L W+ E+G L V SE +W PD+VL
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVL 99
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ W D +L W+ E+G L V SE +W PD+VL
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVL 118
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ W D +L W+ E+G L V SE +W PD+VL
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVL 118
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEWGCSTWL-VSSERLWRPDVVL 348
++ W D +L W+ E+G L V SE +W PD+VL
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVL 118
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.25
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 132
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 133
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 133
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L + W D L WN E+ G ++ +LW+PDV++
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLM 118
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L++ W D L WN ++ G + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L++ W D L WN ++ G + R+W+PDV++
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 400
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L++ W D L WN ++ G + R+W+PDV++
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 352
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L++ W D L WN ++ G + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 33.5 bits (73), Expect = 0.44
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LQMNWIDKRLXWNAXEW-GCSTWLVSSERLWRPDVVL 348
L++ W D L WN ++ G + R+W+PDV++
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,918,713
Number of Sequences: 53049
Number of extensions: 540435
Number of successful extensions: 1160
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4730695893
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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