Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_C04
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...   125   6e-29
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...   125   6e-29
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    30   4.4  
AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB...    29   7.7  
AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA...    29   7.7  

>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score =  125 bits (302), Expect = 6e-29
 Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%)
 Frame = +2

Query: 164 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 343
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 344 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEDNLY-ALMPPFETFLNV-DKTARLXHFFDN 517
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 518 VXTGELIIGAVINRTASG--MMLKVLCTAGPTXXYVXDINVKA-FLPXXNIIQAVDXKNV 688
           +  G+ II   + R ASG  +++K LCTA P   Y+ DI +KA  L        +D +  
Sbjct: 120 LKQGD-IIYTQVTRLASGNRLIVKPLCTAEPKHAYLADIPIKAVILQDFWGPLPLDKQGN 178

Query: 689 SXNYLMNDTVCCEVIXVIPDTDXMGL 766
             +++ ND + CE+  +  DT+ + L
Sbjct: 179 PRSFVQNDILRCEINNISADTERLSL 204


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score =  125 bits (302), Expect = 6e-29
 Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 5/206 (2%)
 Frame = +2

Query: 164 VAQSINYHGQQLQKTWESXXGXXDLXKIGVGALDFAVYQSRHKHLTFQDRXKRLKLHQFI 343
           + Q++ YHGQ LQK W+   G  DL  +G+  +++ VYQ R K+ TFQ+R KRLK+HQF+
Sbjct: 6   IGQALGYHGQPLQKIWDDERGVDDLRLMGLTQVNYGVYQERQKYFTFQERAKRLKMHQFL 65

Query: 344 XKEAGALFDSSLLEDTPSSSTNGTXTLVPEDNLY-ALMPPFETFLNV-DKTARLXHFFDN 517
            ++A  L+D +L+ +    S      L+ + N Y   M PFE FLNV DK     H    
Sbjct: 66  ARKATDLYDRTLVANVMEDS------LLAQGNTYMTQMAPFEFFLNVKDKRKGWAHRLSA 119

Query: 518 VXTGELIIGAVINRTASG--MMLKVLCTAGPTXXYVXDINVKA-FLPXXNIIQAVDXKNV 688
           +  G+ II   + R ASG  +++K LCTA P   Y+ DI +KA  L        +D +  
Sbjct: 120 LKQGD-IIYTQVTRLASGNRLIVKPLCTAEPKHAYLADIPIKAVILQDFWGPLPLDKQGN 178

Query: 689 SXNYLMNDTVCCEVIXVIPDTDXMGL 766
             +++ ND + CE+  +  DT+ + L
Sbjct: 179 PRSFVQNDILRCEINNISADTERLSL 204


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 567 DAVLLITAPMISSPVFTLSKKCXNLAVLSTFRNVS-NGGINAYKLSSGTRVSVPLVDDEG 391
           D + L+     S    T  +KC     LS    V  +G +       G    + + DDEG
Sbjct: 142 DLIALLKGTDTSHDQPTGEEKCTLEKALSELDGVGEDGDVGVTIEGEGQFEIMEIDDDEG 201

Query: 390 VSSSKEESNKAPAS 349
            SSS++ S K PAS
Sbjct: 202 ESSSRKASPKVPAS 215


>AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB,
           isoform B protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -1

Query: 684 FFXSTA*IIFXXGKKALTLMSXTYXXVGPAVQRTLSIIPDAVLLITAPMISSPVF 520
           FF  TA I +     AL +M  T     P   +   IIP  VL+I+  ++++P+F
Sbjct: 431 FFSFTAWIFYGGAMLALIVMRYTKPNY-PRPYKVPIIIPVVVLVISVYLVAAPIF 484


>AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA,
           isoform A protein.
          Length = 532

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -1

Query: 684 FFXSTA*IIFXXGKKALTLMSXTYXXVGPAVQRTLSIIPDAVLLITAPMISSPVF 520
           FF  TA I +     AL +M  T     P   +   IIP  VL+I+  ++++P+F
Sbjct: 422 FFSFTAWIFYGGAMLALIVMRYTKPNY-PRPYKVPIIIPVVVLVISVYLVAAPIF 475


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,808,395
Number of Sequences: 53049
Number of extensions: 558010
Number of successful extensions: 941
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)