Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP17_FL5_C02
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    79   4e-15
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    51   9e-07
U41028-2|AAA82355.1|  233|Caenorhabditis elegans Tetraspanin fam...    44   2e-04
Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    39   0.004
U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin fam...    38   0.007
Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.      37   0.021
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    36   0.036
U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin fam...    35   0.063
AC087079-1|AAK27872.1|  402|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical ...    29   3.1  
U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T prot...    29   5.5  
U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle position...    29   5.5  
U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical ...    28   9.5  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
 Frame = +1

Query: 229 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 408
           V D+L       P + +V+G++  ++ FLGCCGAIRE++C+ V++A              
Sbjct: 41  VLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAV 100

Query: 409 XXXFTYGESIXXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYDQF- 585
              +   +S    I + +     +  ++   E+A   + +  + FECCG T + ++  F 
Sbjct: 101 IIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA---WDKTHQLFECCGVTNSSDWLTFT 157

Query: 586 TLPESCCVKXSILSTFAGNNCTVDAANPGCGPKIGELYHKWNXPIPGVALGVACVEVVXT 765
           T+P+SCC++   +   A  N  +    PGC   + +   K    + G+   +A +++V  
Sbjct: 158 TIPDSCCIEE--IEGCARENAPL--FEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGV 213

Query: 766 LFXLCLXHS 792
            F  CL  S
Sbjct: 214 CFACCLSKS 222


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIXXS 447
           +I IV+GAVM V+A LGCCG    S   ++ Y+                     + +   
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174

Query: 448 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYDQF--TLPESCCVK 612
           + D +  + +           +     LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>U41028-2|AAA82355.1|  233|Caenorhabditis elegans Tetraspanin family
           protein 9 protein.
          Length = 233

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 42/175 (24%), Positives = 65/175 (37%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIXXS 447
           WI + VGA++F++ F GCCGA  ES  ++  +                   T  E    S
Sbjct: 69  WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128

Query: 448 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYDQFTLPESCCVKXSILS 627
           I      + KK S   A          +Q  F+CCG T A   +++ + +  C    +  
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT-AQTQNRY-IQDGLCGPEPL-- 177

Query: 628 TFAGNNCTVDAANPGCGPKIGELYHKWNXPIPGVALGVACVEVVXTLFXLCLXHS 792
                     +A   C  +I  +   W   I  VA  +  +E+   LF   L  S
Sbjct: 178 ----------SAPVNCFDRISHMVQSWGESIVVVAFLLLAIELFAILFSCILCRS 222


>Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical
           protein T14G10.6 protein.
          Length = 308

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIXXS 447
           W  ++VG + F+I F GC G++RE+   +  Y+                 +   + +   
Sbjct: 86  WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNY 145

Query: 448 IMDGVG-VLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYDQFT 588
           I + +  V+   R D +     + +   +Q  + CCG  GA ++D+ T
Sbjct: 146 IRNLLNDVVVGYRDDPD----LQLLIDSMQETWMCCGINGADDWDRNT 189


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 20/96 (20%), Positives = 37/96 (38%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIXXS 447
           W  +  GA++ ++ + GC GA + + C +  +                  F   E I   
Sbjct: 58  WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117

Query: 448 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG 555
           +   +    + R  +    A +  F  +Q +FECCG
Sbjct: 118 VESSMYDTIRNRYSSET--AFKDAFDTVQEKFECCG 151


>U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin family
           protein 17 protein.
          Length = 243

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
 Frame = +1

Query: 253 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGE 432
           L    ++ +V G    ++ FLG CGA+  S  +++ +                    Y +
Sbjct: 23  LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82

Query: 433 SIXXSIMDGVGVLFKKRSDANAXEAAEAVFSE----LQRQFECCGNTGAINY 576
            +  S+ + V  + K +      E    + +E    LQ   +CCG+ G  +Y
Sbjct: 83  KV-YSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133


>Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.
          Length = 395

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 366
           +I IV+GAVM V+A  GCCG    S   ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
 Frame = -1

Query: 464 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 291
           PTPS M S   +P   + T  T  TM  T       TTM+    +   P   K+  T  T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212

Query: 290 APTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVPHPM 111
            PTTMK    T     +   T        TP    S P + TT     ST  T   P  M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
 Frame = -1

Query: 476 LNSTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 300
           + STPT P+   ++  +P     T  T  TM  T       TTM+  +   P   K+  T
Sbjct: 243 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 297

Query: 299 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVP 120
             T PTTMK    T     +   T        TP    S P + TT     ST  T   P
Sbjct: 298 TPTTPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354

Query: 119 HPM 111
             M
Sbjct: 355 TTM 357


>U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin family
           protein 11 protein.
          Length = 317

 Score = 35.1 bits (77), Expect = 0.063
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +1

Query: 268 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 366
           ++  V G ++ V+AFLGCCGA +E   ++  Y+
Sbjct: 84  YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116


>AC087079-1|AAK27872.1|  402|Caenorhabditis elegans Hypothetical
           protein Y37E3.1 protein.
          Length = 402

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 305 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRS-ATTRLK 153
           I N+T P+  +IH  + +W+  +  T  Q  +N  P+P S   R+ A+T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 26/100 (26%), Positives = 44/100 (44%)
 Frame = -1

Query: 464 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 285
           PTP+ M  +  SP  K   ++TT     T   IA  TT   +S +  +  ++  ++    
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411

Query: 284 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 165
           TT+     T     ++S+T      + TP+  SS P  +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 26/100 (26%), Positives = 44/100 (44%)
 Frame = -1

Query: 464 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 285
           PTP+ M  +  SP  K   ++TT     T   IA  TT   +S +  +  ++  ++    
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411

Query: 284 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 165
           TT+     T     ++S+T      + TP+  SS P  +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 26/100 (26%), Positives = 44/100 (44%)
 Frame = -1

Query: 464 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 285
           PTP+ M  +  SP  K   ++TT     T   IA  TT   +S +  +  ++  ++    
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411

Query: 284 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 165
           TT+     T     ++S+T      + TP+  SS P  +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 26/100 (26%), Positives = 44/100 (44%)
 Frame = -1

Query: 464 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 285
           PTP+ M  +  SP  K   ++TT     T   IA  TT   +S +  +  ++  ++    
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411

Query: 284 TTMKIHGPTARWVFSKSLTMVQFIRNXTPIPTSSRPRSAT 165
           TT+     T     ++S+T      + TP+  SS P  +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 417 EEDADHHLHNDDHQQEDCVRDDH 349
           EE  DHH H+ DH  E  +R +H
Sbjct: 45  EELHDHHEHDHDHHDEQLIRKNH 67


>AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical
           protein Y39E4B.4 protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 26/125 (20%), Positives = 43/125 (34%)
 Frame = +1

Query: 229 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 408
           VK  ++T + V  WI I       +I F+G  GA+  S  ++  Y               
Sbjct: 59  VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIG 118

Query: 409 XXXFTYGESIXXSIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYDQFT 588
                   S+  ++ + V   F           A+A  S    ++ CCG     N + F 
Sbjct: 119 ITVLVKRRSVRRTVKEYVFDSFNMN--------AQADISAFNFRYNCCGAENLPNLNCFA 170

Query: 589 LPESC 603
              +C
Sbjct: 171 GQPTC 175


>U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T
           protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 291 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQXXHYGWRR 464
           C V+D V G+L +D +E + G H R   L A  +      +R    ++  H+      R 
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277

Query: 465 RAIQK 479
           +A++K
Sbjct: 278 KALKK 282


>U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle positioning
           protein 2 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 291 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQXXHYGWRR 464
           C V+D V G+L +D +E + G H R   L A  +      +R    ++  H+      R 
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277

Query: 465 RAIQK 479
           +A++K
Sbjct: 278 KALKK 282


>U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical
           protein F53A9.8 protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 411 DADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH 295
           D DHH H+D+H  ED    +H     +   A    D +H
Sbjct: 10  DGDHHDHHDEHHHED--HHEHGADGEHVHHAGDHCDTQH 46


>AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical
           protein C08G9.1 protein.
          Length = 173

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 224 VQFIRNXTPIPTSSRPRSATTRLKKNSTYFTKLVPHPM 111
           VQF++     P   RP+  TT  + NS+    LV  P+
Sbjct: 117 VQFVKQDAQYPIEHRPQPETTYRQNNSSLIVLLVIIPL 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,483,769
Number of Sequences: 27780
Number of extensions: 299446
Number of successful extensions: 1017
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)