Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP17_FL5_C01
(911 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 9e-06
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 38 3e-04
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 38 3e-04
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 38 4e-04
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 43.6 bits (98), Expect = 9e-06
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 203 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWLVSSERL-WRPDVV 379
V + + H I E +ST+ + ++ +W D +L+WN +G + + WRPDVV
Sbjct: 65 VETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASYGNLNVVRWDPTIVWRPDVV 124
Query: 380 LLNAA 394
L N A
Sbjct: 125 LYNNA 129
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 40.3 bits (90), Expect = 8e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 54 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111
Query: 368 PDVVLLNAA 394
PD+VL N A
Sbjct: 112 PDIVLYNNA 120
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 40.3 bits (90), Expect = 8e-05
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 54 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111
Query: 368 PDVVLLNAA 394
PD+VL N A
Sbjct: 112 PDIVLYNNA 120
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 40.3 bits (90), Expect = 8e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 197 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLW 364
++V L L L N+++ T I L+ W D + W+ E+G T L V SE +W
Sbjct: 61 VLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHKFKWDPAEYGGVTELYVPSEHIW 118
Query: 365 RPDVVLLNAA 394
PD+VL N A
Sbjct: 119 LPDIVLYNNA 128
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 40.3 bits (90), Expect = 8e-05
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 164 RTIGSLPPHSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CXT 337
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 40 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 97
Query: 338 WLVSSERLWRPDVVLLNAA 394
V SE +W PD+VL N A
Sbjct: 98 LHVPSEHIWLPDIVLYNNA 116
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 39.9 bits (89), Expect = 1e-04
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA 394
++ W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 76 VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 39.5 bits (88), Expect = 1e-04
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA 394
L++ W D + WN+ E+G L + RLW+PDV++ N+A
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSA 99
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 39.5 bits (88), Expect = 1e-04
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 161 QRTIGSLPPHSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTW 340
+R + + ++ LTL + ++ E + A L + W D L WN E+G
Sbjct: 39 ERPVANESDPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNDSEYGGVRD 97
Query: 341 L-VSSERLWRPDVVLLNAA 394
L ++ +LW+PDV++ N+A
Sbjct: 98 LRITPNKLWKPDVLMYNSA 116
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 39.5 bits (88), Expect = 1e-04
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA 394
L++ W D L WN E+G L + R+W+PDV++ N+A
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSA 131
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 38.3 bits (85), Expect = 3e-04
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAG 409
N+ E ++ L++ W D +L W+ ++G L + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 410 DYALR 424
+Y +R
Sbjct: 122 NYEVR 126
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 38.3 bits (85), Expect = 3e-04
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA 394
L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 76 LSLEWNDYNLRWNDSEYGGVRDLRITPNKLWKPDVLMYNSA 116
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 37.9 bits (84), Expect = 4e-04
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE++W PD+VL N
Sbjct: 82 VKQKWFDYKLRWDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,834
Number of Sequences: 2352
Number of extensions: 12927
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -